Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3283 ATGGAGGATGAGAATTTGGACACCCCCAAATCCATCCTTTACGAAACCCTGAGTCCCTTCAATCTTTCAACCCCCAACCAGTCTCCGGTTCCCGATGAACTAGAGCCCTATTCTATTTTCCGGAACGAAATTTCTCTGTCGACCCTTCAATCTCCTTCGGCGGAGACTGCTGCCCCCGATTTCTTTTCTCTTGAAGTTGGCAATGGTGATGCTTCTGAGCAAGAATCCCTCTCCTTCCCATTGCCTGAACCAGTTGCAGCTACTGAGCCGAAGACTCCGGCTCTTGTGCCTGAGCCAAAGCTTGAGAGCAGTTGGTTTCGTGGAGACTGCAAGTTCAGGAGTCCCATGCTTCAGCTGCATAAAGAGATAGTAGATTTTTGTGAATTCTTGTCACCTACTTTGGAAGAAAAAGCTTCACGTGACGTGGCAATAGAATCTGTGTTTCAAGTTATAAAACATATATGGCCTCATTCCCAGATCGAAGTTTTTGGTTCTTTTCGGACTGGGCTATATCTTCCAACTAGTGATGTTGATGTTGTGATTTTGAAGACAGGATTGCCAAGTCCACAGCTTGGCTTAAATGCACTTTCTCGGGCATTGTCACAAAGGGGCATGGCAAAAAATATCATGGTCCTTGGAAGGGCTCGAGTGCCGATTATTAAATTTGTTGAAAAGAAAAGTGGTCTTTCATTTGATATAAGTTTTGATGTGGATAATGGACCCAAGGCTGCTGATTATATTCAGGAAGCAGTGGCTAGGTGGCCCCCACTCCGGCCTTTATGTTTGATTTTGAAAGTGTTCTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGGATAGGTTCTTATGCTCTCCTTGTCATGCTTATGGCAATGCTACGAAATGTCCGTGAGAGCCAAGTATCTGCAGAACACAACTTGGGAGTCCTTTTGGTGAACTTTTTTGATTTCTATGGACGCAAATTGAACACTGCAGATGTTGGTGTCTCTTGCAATGGGACAGGAACCTTTTTCTTGAAAAGCAAGAAAGGGTTTTTAAACAAGGGACGACCGAGTCTTTTAGCAATTGAAGATCCCCAGGCACCTGATAATGACATTGGGAAGAACTCGTTTAATTATTTCCAGGTTAGGTCAGCTTTTGCAATGGCTTTCAAAACACTGACCAATGCCAATATCATCATGAGCTTAGGCCCTAAAAGAAGTATTCTTGGAACTATAATTAGACCAGACCCTGCCTTGCTGGAGCGTAAAGGGGGTTCATATGGGGATGTGACTTTTAATGCCTTGCTTCCCGGAGCAGGCGAGCCATTACAAGTACACTATGGAGGCCATGATATCTTATGTAATTGGGATTTTGATGATGATGAGGAACCCCTGCCTCGGGGAGGAGATTCTGCTGTGTATAAAAGCACTTCAGGGAAGAGAAAATCTTCAGTTAAGGAAAATCCCAAAAAGAAGCTAAAGGAAAATGGGCATATGGGGATGATGAGGGATGGAGAGAATGTCTCGGGGAAAGAGAACAGTATTAAAAAGAAAAGTAGGAGAAAACAATGA 1557 0.4374 MEDENLDTPKSILYETLSPFNLSTPNQSPVPDELEPYSIFRNEISLSTLQSPSAETAAPDFFSLEVGNGDASEQESLSFPLPEPVAATEPKTPALVPEPKLESSWFRGDCKFRSPMLQLHKEIVDFCEFLSPTLEEKASRDVAIESVFQVIKHIWPHSQIEVFGSFRTGLYLPTSDVDVVILKTGLPSPQLGLNALSRALSQRGMAKNIMVLGRARVPIIKFVEKKSGLSFDISFDVDNGPKAADYIQEAVARWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLVMLMAMLRNVRESQVSAEHNLGVLLVNFFDFYGRKLNTADVGVSCNGTGTFFLKSKKGFLNKGRPSLLAIEDPQAPDNDIGKNSFNYFQVRSAFAMAFKTLTNANIIMSLGPKRSILGTIIRPDPALLERKGGSYGDVTFNALLPGAGEPLQVHYGGHDILCNWDFDDDEEPLPRGGDSAVYKSTSGKRKSSVKENPKKKLKENGHMGMMRDGENVSGKENSIKKKSRRKQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3283 518 MobiDBLite consensus disorder prediction 475 496 - -
Acco01g3283 518 FunFam non-canonical poly(A) RNA polymerase PAPD5 132 240 - -
Acco01g3283 518 CDD NT_PAP_TUTase 140 249 - -
Acco01g3283 518 FunFam Poly(A) RNA polymerase cid14 233 390 - -
Acco01g3283 518 Pfam Nucleotidyltransferase domain 147 235 IPR002934 GO:0016779
Acco01g3283 518 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 395 - -
Acco01g3283 518 Gene3D - 116 390 - -
Acco01g3283 518 MobiDBLite consensus disorder prediction 460 518 - -
Acco01g3283 518 Pfam Cid1 family poly A polymerase 307 365 IPR002058 -
Acco01g3283 518 Gene3D Beta Polymerase, domain 2 132 240 IPR043519 -
Acco01g3283 518 PANTHER POLY(A) RNA POLYMERASE 98 487 IPR045862 GO:0043631|GO:1990817
Acco01g3283 518 SUPERFAMILY Nucleotidyltransferase 113 267 IPR043519 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3283 01 50040393 50046418 Acco01g3283 01 50040393 50046418 ECH