Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3249 ATGGCATCGACTTCAAACGCTGGTGGCGTTAGTGGAAGAATAAGAAATGCAGCTTCGACTTTCTTCTCTGATAGTCAGCCTCTCATTACTGAAACCCGAAGGGTTATGGGTTTGATGAAGGAAATTGCAGTTGATTTGGAGAAAGATAAGCAGTCTGATATGGTGAAGGAGCTTGAAGATGCAGTCGTGGAGTTATTGGGCATGTCTGAAGATTTTGCACATTTTTCATCTGCAGTTCAGTCTGTTGCAGACAGATACCTGCCGGGAGAAGAGTTGATTGATTTTAAGAAGTTGTTTGAGGAGGATGCTTCAAAGATAAAGGCCAATTCATCTTCAGACCCAAAAAAGCATCCCATAATGCGCCAATTTAAGGAAGCTGTATGGAATGTTCATCATGAGGGACAGCCCATGCCCGGTGATGAGCAAGAAGACATTGTAATGACTACTACGCAGTCCAATATTTTGAATACAAAATGTCCATTAACTGGGAAGCATGTCACTGAGCTTGCAGAACCTGTTCGAAGTATGGAGTGTAGGCATGTATATGAGAAGCAGGCGATAATGCAATATTTGCGGTCAAAGAACTCCCGTAGTCCATGCCCTTCAGCAGGTTGCCCAAAGTTCTTGAAGGTGGATAAGGTGGTCTGTGATACGTTATTACTGGTTGAGATTGATGAAATGCGCAGAACGGGCAAAGGAACTGTTCCAGTGGAAGATTTTACTGCGCTTGATGCAGATCAGTGA 744 0.4355 MASTSNAGGVSGRIRNAASTFFSDSQPLITETRRVMGLMKEIAVDLEKDKQSDMVKELEDAVVELLGMSEDFAHFSSAVQSVADRYLPGEELIDFKKLFEEDASKIKANSSSDPKKHPIMRQFKEAVWNVHHEGQPMPGDEQEDIVMTTTQSNILNTKCPLTGKHVTELAEPVRSMECRHVYEKQAIMQYLRSKNSRSPCPSAGCPKFLKVDKVVCDTLLLVEIDEMRRTGKGTVPVEDFTALDADQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3249 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 234 IPR013083 -
Acco01g3249 247 SUPERFAMILY RING/U-box 159 204 - -
Acco01g3249 247 CDD SPL-RING_NSE2 157 226 IPR004181 GO:0008270
Acco01g3249 247 ProSiteProfiles Zinc finger SP-RING-type profile. 141 229 IPR004181 GO:0008270
Acco01g3249 247 PANTHER UNCHARACTERIZED 10 231 IPR026846 GO:0000724|GO:0019789|GO:0030915
Acco01g3249 247 Pfam Zinc-finger of the MIZ type in Nse subunit 144 205 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3249 Acco-ChrAcco01 49774599 49780416 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3249 01 49774599 49780416 Acco01g3249 01 49774599 49780416 ECH