Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3231 ATGAGAACCATTCTGAGAAAACTATGCTCTGTTTTATTCATTCTTTTTGCAATAACGATTGTGGCTGAAGGGCGTCGTCTGGACTCCAGAACTGTTCATAATGAATTGGTTTCAGATGGAGCTTATGATGATGATGATGATGAACTTCAACACGATAAAACTTCTTACTTGCTTTTTAAAGGCATTGGATTTGAATCCTATTCTCAAGAAGAAAACTGCAAGCAATTGTATGGGTTCTTGCCTTGTTCAAACAATATTTTTGGGCATCTGTTTCTGATTTTGGTTTATGAGTACTTGTTGTTCCATGGAGAATCGTATTTGGCTGATGGAGGTGAGCAGGTCTTCAAGATTCTTGGTCCTGGGATTTTCGGTGCAAGTGCCTTTCACATCCTTAGTGCCCTTCCCGAGTCCTTAATTCTTCTTGTTTCTGGACTTCTCAGCAGTAAGGAGATTGCACAAGAGTATGCTTTTACAGGAGTTGGCTTATTGGCTGGATCATCCATCTTGCTCTTGACATTAGTATGGGGAACCCGTGTTATAACTGGGGCTCAAGAATTTAACACTGATTCAAGTCTTAGAATTTGTGATGGTTCTAATTCAGTACCTACAAGACTAAAAGCATATTTGACTGGTTATGGCATTACTACAGATTTGGAGACCAGCCAAACTGCAAGAATCATGCTTGTCTCTGTCACACCACTCATAATAATGCAAATCCCCAACTTATTTCAGTTCTCTTCTGGCCAAAGAACTGTGACTTTGATAATTGCTCTCATCATCAATGCCATTTTTCTGCTCCTGTACTTCAGCTACCAGATTTTTGAACCTTGGATACAGAAAAGAAGATTGGAATATGTGAAACGAAATCATTTACTAGTTAAAATATTACGACATGTTGAGAAGAGTACCCTGGAGAGGATCCTCACCAAGCATGGATCTCCAAATATAAGTGCCATAAGAAGGCTATTTAGAGAAGTGGATCAAAATGAAGACAGTGTTGTATCAGCTTCTGAAGTAAAACAGATCCTGCTTAAGAGCAGATCAAGTGAAAGAAGTATCAATGAAGAGGAAATGGAAGACATGTTAAGAATTTTTAACTTGGATGATGATGACAATAGAATAACTAAGGATGAATTCGTGAGTGGCTTTATAAAATGGCTTGAACAAACCAAATTTGCTGTGAATAAACAGTATATGTCAAGGAAATCTCTCAAGGAGTTATATCAGGTGTTTGAGCCATGGATTCAGAACAAAAGAAGAGAAAAAGAAACGAAGAAACATATCATGCCTGAAATTTTTAGGCATATTCAAAGCGATTTGGTTGTCAACCTTCTCACTGAAGACGGCAAACCTGATGAACTTGCTATAAGAAGGTTATTCGACAAGCTGGATACCAATAAAGATAACTGCATTTCCCGGTCTGAGTTAAGAAAACTACTCACAGAGATCAATATTACTAGAGCATCAATAGATGTGGACGAAGCAGCTAATAAATTCATTGAAGAATTTGACGTTAACAGAGACCATGTGATTAGTGAGGAGGAATTCATATCTGGGTTCAAAAAATGGCTCAACTTATCATCATCATCACCTTCCAGTCCTGCTCTTCTTTCAGAGTCTGAGTCTGAAGAAGATATACTTCAGATGTGGGAAGAGACAGACATGGTGGTGGAAGAGAATCAAGGAAAAGCAGTGGTTGATAAATCGGTATGGGCATGGGTGAAGGCAATTATAAATGTAGTGGTGGGGATTGCCATATTATCTGTTCTTGCAGAGCCCTTGATAGAGAGTGTACGCAGCTTTTCAAACAGTGTAGGAATTAATTCATTCTTCATCTCATTCATAATGGTCCCATTGGCTACAAATGCTAAAAAGGCAATTGCTGCAGTCAAAGAAGCAAGCAGTGAGAAGCCCAGAACTACTTCTCTTGCTATTTCTGAGTTATATGGAGCGGTGTTCATGAACAATGTGCTAGGGTTCTTTGCGATATCAGTTTTGATATATGGAAGAGGAATCAGATGGGAGTTCTCAGCAGAAACACTAGTTGTGGCAGTGGTTTGTGTTGTGATGGGGCTTGATGCTAGTTTTAAATCCACTTTTCCTGTATGGTCTTCCTTCTCTGCATACCTCTTGTATCCATTCTCTCTTGTCCTCGTTTTTCTCCTCAAACATTATCTCTCCTATTTCGGAGCGGGTAATACAAATGAGTTAATAATGGTCGCCATCGCCTCGTTCCTTCCCGCTCTCTCTCTCTCTCTACTAGCGCTTTCTGCTCATTTCCAGATTCGGATTCGCGCCATGCTATGTCGCTATTTCTCACTCCCCCTCTTCAAGATCTCGTATAAACGCCTTAAAGTCCGCAAATATTCCCCCTCTTTGTGCCTAGATTAG 2391 0.3969 MRTILRKLCSVLFILFAITIVAEGRRLDSRTVHNELVSDGAYDDDDDELQHDKTSYLLFKGIGFESYSQEENCKQLYGFLPCSNNIFGHLFLILVYEYLLFHGESYLADGGEQVFKILGPGIFGASAFHILSALPESLILLVSGLLSSKEIAQEYAFTGVGLLAGSSILLLTLVWGTRVITGAQEFNTDSSLRICDGSNSVPTRLKAYLTGYGITTDLETSQTARIMLVSVTPLIIMQIPNLFQFSSGQRTVTLIIALIINAIFLLLYFSYQIFEPWIQKRRLEYVKRNHLLVKILRHVEKSTLERILTKHGSPNISAIRRLFREVDQNEDSVVSASEVKQILLKSRSSERSINEEEMEDMLRIFNLDDDDNRITKDEFVSGFIKWLEQTKFAVNKQYMSRKSLKELYQVFEPWIQNKRREKETKKHIMPEIFRHIQSDLVVNLLTEDGKPDELAIRRLFDKLDTNKDNCISRSELRKLLTEINITRASIDVDEAANKFIEEFDVNRDHVISEEEFISGFKKWLNLSSSSPSSPALLSESESEEDILQMWEETDMVVEENQGKAVVDKSVWAWVKAIINVVVGIAILSVLAEPLIESVRSFSNSVGINSFFISFIMVPLATNAKKAIAAVKEASSEKPRTTSLAISELYGAVFMNNVLGFFAISVLIYGRGIRWEFSAETLVVAVVCVVMGLDASFKSTFPVWSSFSAYLLYPFSLVLVFLLKHYLSYFGAGNTNELIMVAIASFLPALSLSLLALSAHFQIRIRAMLCRYFSLPLFKISYKRLKVRKYSPSLCLD 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3231 796 Pfam EF-hand domain pair 455 519 IPR002048 GO:0005509
Acco01g3231 796 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Acco01g3231 796 ProSiteProfiles EF-hand calcium-binding domain profile. 314 349 IPR002048 GO:0005509
Acco01g3231 796 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 75 721 IPR004713 GO:0006812|GO:0008324|GO:0016020
Acco01g3231 796 Gene3D - 290 382 - -
Acco01g3231 796 Gene3D - 383 523 - -
Acco01g3231 796 SMART efh_1 455 483 IPR002048 GO:0005509
Acco01g3231 796 SMART efh_1 318 346 IPR002048 GO:0005509
Acco01g3231 796 SMART efh_1 495 523 IPR002048 GO:0005509
Acco01g3231 796 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Acco01g3231 796 Pfam Sodium/calcium exchanger protein 579 720 IPR004837 GO:0016020|GO:0055085
Acco01g3231 796 SUPERFAMILY EF-hand 313 521 IPR011992 -
Acco01g3231 796 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Acco01g3231 796 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Acco01g3231 796 CDD EFh 456 521 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3231 Acco-ChrAcco01 49667016 49672842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3231 407 728 EF-hand Containing Proteins AT1G53210 38.953 9.50e-73 247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3231 01 49667016 49672842 Acco01g3231 01 49667016 49672842 ECH