Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3219 ATGCGAATTATCCGCACCCAATGGTTCCTCACTCTCTCACACAGAACCACTTCGAAGCATAAAATGGTTTTGCGTCACTCACTTCTAGAACTCCCTCGTTCCCTTCCTAAGTTCACGCCCATACCCACCCTTCTCAAAAAACGCTTTACCTCTATCTCTGCCTCTGCAACAGCTATGGCTTCCACTGCTCGAAAGGTTCTGGTTCCGATTGCCAATGGCACGGAGCCTATGGAGGCTGTGATTACGATCGATGTTCTCCGGCGATCGGGAGCTGACGTTACCGTTGCTTCTGCTGGGAAGCAGATTCGGGTCGAAGCTCTACATGGCGTCAAGATTATTGCTGATGCCCCTGTTTCTGATGTTGCTGATACTACTTTCGACCTTGTCGCTTTACCTGGAGGTGTTCCCGGTGTGGATAATCTCAGAGACTGTGAGACTTTGGAAAGCTTAGTGAAAAAGCACGTTACAGATGGACGGCTTTATGCTGCAGTTTGCGCTGCTCCTGCCGTGGTACTTGGATCATGGGGTTTGCTCAAGGGACTGAAGGCAACTGGCCATCCATCACTCATGGAAAAATTGGCCTCTCATGCCACTGCTGTTGAATCAATAGTACAGCTGGATGGAAGAGTTGTGACAAGCCGTGCACCAGGCACGACCATGGACTTTGGCGTTGCACTGGTTGAGCAGTTATATGGAAAGGAGAAGGCCAATGAAGTTGCTGGTCCACTGGTCATGCGATCCAATCACGGGGATGAATATACTTTTACTGAGTTAAACCCAGTTCAATGGACGTGTGATAATCCTCCCAAGATTCTTGTACCAATTGCTAATGGCACTGAGGAAATGGAAGCTGTAATTATCATTGATGTTCTGCGAAGAGCAAAAGCAAATGTTGTAGTTGCTTCTCTTGAGGACAAAGTAGAGATTGAAGCTTCTCGAAAAGTTAAACTAGAGGCAGACATGCTCCTTGATGAGGCAGCCAAACTTACATATGACCTAATTGTGCTGCCAGGTGGACTCGGTGGTGCCCAAGCTTTTGCAAAGTCAGAAACTCTGGTCGGTTTGCTGAAAAAGCAGAGAGTGTCAAACAGATATTATGGTGCAATTTGTGCATCCCCAGCGTTAGTCTTGGAGCCCCATGGCTTGCTAAAGGGTAAGAAGGCCACTGCCTTTCCAGCTTTGTGCAACAAGTTATCAGATAAGAGCGAAATTGAAAACAGGGTTGTGGTTGACGGCAACCTTATTACCAGCAGAGGACCTGGGACCTCCATCGAGTTTGCATTAACTATTGTGGAAAAGCTGTTTGGGCGGCAGTTAGGACTGGAACTTGCAAAAGCGATGGTCTTCACACGCGCATAG 1359 0.4783 MRIIRTQWFLTLSHRTTSKHKMVLRHSLLELPRSLPKFTPIPTLLKKRFTSISASATAMASTARKVLVPIANGTEPMEAVITIDVLRRSGADVTVASAGKQIRVEALHGVKIIADAPVSDVADTTFDLVALPGGVPGVDNLRDCETLESLVKKHVTDGRLYAAVCAAPAVVLGSWGLLKGLKATGHPSLMEKLASHATAVESIVQLDGRVVTSRAPGTTMDFGVALVEQLYGKEKANEVAGPLVMRSNHGDEYTFTELNPVQWTCDNPPKILVPIANGTEEMEAVIIIDVLRRAKANVVVASLEDKVEIEASRKVKLEADMLLDEAAKLTYDLIVLPGGLGGAQAFAKSETLVGLLKKQRVSNRYYGAICASPALVLEPHGLLKGKKATAFPALCNKLSDKSEIENRVVVDGNLITSRGPGTSIEFALTIVEKLFGRQLGLELAKAMVFTRA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3219 452 Coils Coil 300 320 - -
Acco01g3219 452 NCBIfam DJ-1 family protein 65 241 IPR006287 -
Acco01g3219 452 NCBIfam DJ-1 family protein 270 445 IPR006287 -
Acco01g3219 452 FunFam Protein DJ-1 homolog C 58 248 - -
Acco01g3219 452 SUPERFAMILY Class I glutamine amidotransferase-like 268 450 IPR029062 -
Acco01g3219 452 Gene3D - 56 256 IPR029062 -
Acco01g3219 452 Gene3D - 264 452 IPR029062 -
Acco01g3219 452 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 64 243 - -
Acco01g3219 452 FunFam Protein DJ-1 homolog C 263 452 - -
Acco01g3219 452 CDD GATase1_DJ-1 66 230 - -
Acco01g3219 452 Pfam DJ-1/PfpI family 270 432 IPR002818 -
Acco01g3219 452 Pfam DJ-1/PfpI family 64 229 IPR002818 -
Acco01g3219 452 SUPERFAMILY Class I glutamine amidotransferase-like 64 247 IPR029062 -
Acco01g3219 452 CDD GATase1_DJ-1 271 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3219 Acco-ChrAcco01 49604796 49608300 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3219 01 49604796 49608300 Acco01g3219 01 49604796 49608300 ECH