Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3200 ATGCGTGTTATACTTGCTTCAAACCGTGGAACTGTTATGGAGCTTGGGATCACCCCCATTGTAACCTCTGGGCTGGTGATGCAACTGCTTGCTGGTTCAAAGATCATTGAAGTAGACAACAATGTCCGTGAAGATCGTGCCCTCTTAAACGGAGCACAGAAGCTACTTGGCATCTTGATAGCTGTTGGAGAGGCAGTTGCCTATGTTCTTTCTGGGATGTATGGAAGTGTGGGCCAACTTGGAGTAGGGAACGCTATACTCATCATCGTTCAGCTATGCTTTGCTGGTATCATTGTGATTTGCTTAGATGAGCTTCTTCAAAAAGGATATGGCCTGGGTTCTGGAATTTCCCTCTTCATTGCAACTAATATCTGTGAAAATATAATATGGAAGGCATTTAGTCCCACCACTATTAACAGTGGACGGGGTGCTGAATTTGAGGGTGCTGTTATTGCTCTATTCCATTTGTTGATAACTAGAACCGACAAAGTTCGTGCTCTCCGTGAGGCATTTTACCGGCAGAATCTTCCAAATGTGACAAATCTTCTTGCTACTGTTTTGGTCTTCTTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGACAGCAGGGTTCATATCCTATTAAACTATTTTATACGTCTAACATGCCCATTATTCTTCAGTCGGCTCTGGTTTCCAATCTGTACTTTATCTCTCAGCTGCTTTACAGAAAATACAGCGGGAACTTCATTGTGAACTTATTGGGCAAATGGAAGGAAACTGAATATGGAGGTGGGCAGTCTATTCCAGTGGGTGGTCTTGCATATTACATCACAGCACCATCTAGCTTAGCTGATATGGCAGCAAATCCTTTCCATGCTTTGTTCTATTTGGTGTTCATGTTGTCAGCCTGCGCTTTGTTCTCTAAGACTTGGATTGAAGTCTCTGGATCATCTGCTAAAGATGTTGCCAAACAATTGAAGGAACAACAAATGGTGATGCCAGGGCACCGTGAGTCGAACTTGCAGAAGGAGCTGAACCGATATATCCCCACGGCGGCGGCATTTGGAGGGATTTGCATCGGTGCACTGACAGTGTTAGCAGATTTCATGGGCGCAATTGGGTCAGGCACAGGGATTTTACTTGCAGTGACCATTATTTATCAGTACTTCGAGACATTCGAGAAGGAGAGAGCCAGCGAGCTTGGCATCTTTGGTTTCTAA 1233 0.4428 MRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFIVNLLGKWKETEYGGGQSIPVGGLAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGIFGF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3200 410 PIRSF SecY_Sec61alpha 2 406 IPR002208 GO:0015031|GO:0016020
Acco01g3200 410 SUPERFAMILY Preprotein translocase SecY subunit 2 400 IPR023201 -
Acco01g3200 410 NCBIfam preprotein translocase subunit SecY 1 401 IPR002208 GO:0015031|GO:0016020
Acco01g3200 410 FunFam Transport Sec61 subunit alpha isoform 2 1 407 - -
Acco01g3200 410 Gene3D SecY subunit domain 1 408 IPR023201 -
Acco01g3200 410 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 403 IPR002208 GO:0015031|GO:0016020
Acco01g3200 410 PRINTS Preprotein translocase SecY subunit signature 109 132 - -
Acco01g3200 410 PRINTS Preprotein translocase SecY subunit signature 10 30 - -
Acco01g3200 410 Pfam SecY 11 393 IPR002208 GO:0015031|GO:0016020
Acco01g3200 410 ProSitePatterns Protein secY signature 1. 11 30 IPR030659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3200 Acco-ChrAcco01 49442977 49445729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3200 1 410 Miscellaneous Gene Families AT2G34250 92.439 0.0 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3200 01 49442977 49445729 Acco01g3200 01 49442977 49445729 ECH