Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2140 ATGAATGATACAGCATCAAAAGATAAAGTCTGCAATCTCCAGCCACAGCAAGCAGAAGAATCACCCGATTCAAGCACTTTGGCCTATTCCAGATTATCTAATTCTATCTTGACCTTTGTTTATGACAGATTCAGGAAGCCTCGCTACCCAGAGCTACCTGCTCCCCAGCTTGCAACTGACTTCACTCTCCTCTCTCGTGCTCTCACTTCCACCATGGAACTTCCCTTCTTCCTGCTCTCCTCTCTCCTCTTGATCCTCATTCCCTCTGCAGTTCACGCCACCACTTTCACATTGGTCAACCGATGTCGCTACACCGTCTGGCCAGGAATCCTCGCTAATGCCGGCAGCGGAAGCCTCGACACTACCGGATTCGAGCTCTCCAAAGATGCTTCTCGCTCTTTCCTTGCTCCCACCGGCTGGTCCGGTCGCTTCTGGGCCCGAACCGGCTGTAATTTCGATGGATCCAGCACCTGTGTCACCGGCGACTGTGGCTCCGGTCAGCTCGAGTGCAACGGCGCCGGAGCATCGCCGCCTGTCACTCTCGCCGAGTTTACGCTCAGTAGTAGTACTGGAGGGCAGGATTTTTACGATGTGAGTCTTGTGGATGGGTACAATGTGCCGATGATCGTGGAAGGGACGGGCGGGTCGGGTCTGTGCGGTTCTACCGGCTGCGTTTCGGATCTGAATCGGCAGTGCCCGCAGGAGCTGAGAGTGGGGGAGGGAGACGCGTGTAAGAGTGCGTGTGAGGCATTCAACAGCCCTGAGTACTGTTGCAGCGGCGCTTATAGCTCGCCGGCGACGTGTAAGCCATCAGTGTACTCGGCAATGTTCAAGTCTGCTTGCCCGAAATCGTATAGCTACGCCTACGACGACGCTACGAGCACGTTTACGTGTACGGGAGCCGACTATACGGTGACGTTTTGCCCATCCTCTCCAAGTCAGAAATCTTCTCAAGATTATTATGCCCCTCCCATCATGGCCTCAACACCACCACCTCCAATACCAATACCATATTATTCGCCATATCCCGGATTCGGAGCCACCTCCACGGCCACCGGAGCAACCATGGGTTCCGCCTCCCAATTTGGCTCCGACCCCAAGTTGGCCTCGGACTCGGGCACGAACTCAGACTCAACTATTGGGTACTCGGTTACGGGTTCAGGGTCAAATGGAGAGTCCATGCTGGCAGATAGCTCATATATAGCTGGTCTGGCCATGGGAGCTTCCCCCACCACACTCTCTTTGTCGTCTCTACAATGTGCCTCAGTCTTCATTTGTAGTATTTTGCTTAGTTTCTTCCTCTTTTAG 1308 0.5398 MNDTASKDKVCNLQPQQAEESPDSSTLAYSRLSNSILTFVYDRFRKPRYPELPAPQLATDFTLLSRALTSTMELPFFLLSSLLLILIPSAVHATTFTLVNRCRYTVWPGILANAGSGSLDTTGFELSKDASRSFLAPTGWSGRFWARTGCNFDGSSTCVTGDCGSGQLECNGAGASPPVTLAEFTLSSSTGGQDFYDVSLVDGYNVPMIVEGTGGSGLCGSTGCVSDLNRQCPQELRVGEGDACKSACEAFNSPEYCCSGAYSSPATCKPSVYSAMFKSACPKSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSQDYYAPPIMASTPPPPIPIPYYSPYPGFGATSTATGATMGSASQFGSDPKLASDSGTNSDSTIGYSVTGSGSNGESMLADSSYIAGLAMGASPTTLSLSSLQCASVFICSILLSFFLF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2140 435 FunFam THAUMATIN-LIKE PROTEIN 1 94 309 - -
Acco01g2140 435 Pfam Thaumatin family 100 309 IPR001938 -
Acco01g2140 435 MobiDBLite consensus disorder prediction 357 376 - -
Acco01g2140 435 PANTHER OS03G0233200 PROTEIN 81 309 IPR001938 -
Acco01g2140 435 Gene3D Thaumatin 94 309 IPR037176 -
Acco01g2140 435 CDD TLP-PA 95 308 - -
Acco01g2140 435 SUPERFAMILY Osmotin, thaumatin-like protein 94 310 IPR037176 -
Acco01g2140 435 ProSiteProfiles Thaumatin family profile. 93 309 IPR001938 -
Acco01g2140 435 SMART tha2 96 309 IPR001938 -
Acco01g2140 435 PRINTS Pathogenesis-related protein signature 299 308 IPR001938 -
Acco01g2140 435 PRINTS Pathogenesis-related protein signature 95 107 IPR001938 -
Acco01g2140 435 PRINTS Pathogenesis-related protein signature 143 154 IPR001938 -
Acco01g2140 435 PRINTS Pathogenesis-related protein signature 194 210 IPR001938 -
Acco01g2140 435 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2140 Acco-ChrAcco01 37304831 37308285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2140 71 318 Receptor kinase-like Gene Family AT5G38280 46.947 4.89e-72 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2140 01 37304831 37308285 Acco01g2140 01 37304831 37308285 ECH