Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2116 ATGGAGATTACTGGTTCAGGTACTCCAACGAAGAAAAGTGGTGGAAATGGACAGGTTCTGGACGGTTCGAATATTATGGAGTTAGTTGGAAACGATCAAGTTTTCGACAATTTCGTGGACCATAAGTTTCAGGAGCTGGATAGAGACAGAGACGGGAAGCTCTCCGTGAAGGAGCTTGAACCTGCCGTTGCTGATATTGGTGCCGCCTTAGGTTTGCCCGCTCAGGGTACTAATCCCGATTCCGATCACATCTATTCTGAGGTGTTGAATGAATTCACCCATGGAAAGCAAGACAAAGTGAACAAGACTGAGTTCAAAGAGGTACTCTCAGACATTCTGTTGGGCATGGCTGCTGGGCTGAAGCGAGACCCAATTGTGATACTTCGTATGGAAGGGGAAGATCTCCTTGAGTTTGTTAGTGGACCAAGTTATGAAGCAGAAATGACTTCCATATTCTCCCAGATTGAGTCGCCTGATGCTTCACTCCGTGAGCATATAATTGCAGCTCTGGGAAAACTCACAGTTGAGCATGGGGTCCCTCCTACTTCAGATTCTTGGGTTTTTGATAACATCGTGGAACCGGCTCTACAGTCTCAAGCTGGTCCGGATTTGGATAAGCCTGCTTCTCAAGAGACATTTTTGGTGGAGTTTAAGAAAGTAGCATCGGCTGTGGCTGATCGTCTGAAGGAGCAACCTGTCATTGTTGCTCACAGTGAGAACGCCTTTGATGGAAGTGGCATCAAGAGACTATTATCCAACAAGTTTGAAGTAGACAAGACCTTGAACTCAGCTTTAGAAAATATACCTAAAGATCGCAATGGAAAACTGTCAAAGGAATATCTGCGAGTGGCACTTGATGTGGTGTCTCCATCTGCTGGTTTGCCTCCAGTTGGTGCAATCGAAGAGATGGATAAGGTTGTTGGTGAAGTGTTCAAGATGATAAATGCAGATGATGGGAAGATGGTTAAAGAAGATGAATTCAAGAAAATATTAACTGAAATACTGGGGAGTATCATGTTGCAGTTAGAGGGAAGTCCCATATCTGTTTCTTCAAATTCAGTTGTGCATGAGCCTCTAGGCTCTTCTTCCTCGCTCTTGCAGCCGCCATCTTCTAGTGAAACGGCTTAA 1128 0.4495 MEITGSGTPTKKSGGNGQVLDGSNIMELVGNDQVFDNFVDHKFQELDRDRDGKLSVKELEPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQDKVNKTEFKEVLSDILLGMAAGLKRDPIVILRMEGEDLLEFVSGPSYEAEMTSIFSQIESPDASLREHIIAALGKLTVEHGVPPTSDSWVFDNIVEPALQSQAGPDLDKPASQETFLVEFKKVASAVADRLKEQPVIVAHSENAFDGSGIKRLLSNKFEVDKTLNSALENIPKDRNGKLSKEYLRVALDVVSPSAGLPPVGAIEEMDKVVGEVFKMINADDGKMVKEDEFKKILTEILGSIMLQLEGSPISVSSNSVVHEPLGSSSSLLQPPSSSETA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2116 375 SMART efh_1 260 288 IPR002048 GO:0005509
Acco01g2116 375 SMART efh_1 38 66 IPR002048 GO:0005509
Acco01g2116 375 SMART efh_1 306 334 IPR002048 GO:0005509
Acco01g2116 375 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Acco01g2116 375 Gene3D - 39 337 - -
Acco01g2116 375 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 130 354 - -
Acco01g2116 375 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Acco01g2116 375 SUPERFAMILY EF-hand 42 343 IPR011992 -
Acco01g2116 375 Pfam EF-hand domain pair 41 108 IPR002048 GO:0005509
Acco01g2116 375 MobiDBLite consensus disorder prediction 351 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2116 Acco-ChrAcco01 37046569 37050132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2116 18 374 EF-hand Containing Proteins AT4G38810 69.722 1.01e-179 502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2116 01 37046569 37050132 Acco01g2116 01 37046569 37050132 ECH