Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2101 ATGTCTCCAGCGGGCGCAAAGTGCAGCAAAATCCGACACATTGTCAGAATCCGGCAGATGCTTCTCCGGTGGCGTAAGAAGGCGCGCACAACGGCTGTTCGAACACCGTCCGATGTACCAGCTGGGCACTTGGCCGTTTGTGTGGGACCCAGCTGCCGGAGGTTTATCGTGAGAGCGACGTACCTGAACCACCCGGTCTTCAACAAGCTTCTGGCTCAAGCCGAAGAGGAGTACGGTTTTTGCAATCAAGGTCCCCTGACGATCCCTTGCGACGAGTCAATGTTCGAGGAGGTCCTCCGGGCCGTGTCCCTGTCTGAATCGGGTCGCTCCATGCGCTTCTTGAACCGGGATGATCTCCAGATGCGCTGCCAAGCGGACTTGGTGGGAGAATCCTGGCCGTTGCTTCATGAGGAGCCCATCTGTTAA 426 0.5751 MSPAGAKCSKIRHIVRIRQMLLRWRKKARTTAVRTPSDVPAGHLAVCVGPSCRRFIVRATYLNHPVFNKLLAQAEEEYGFCNQGPLTIPCDESMFEEVLRAVSLSESGRSMRFLNRDDLQMRCQADLVGESWPLLHEEPIC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2101 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
Acco01g2101 141 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2101 Acco-ChrAcco01 36907358 36907783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2101 6 110 Calmodulin-binding Proteins AT4G34750 56.075 4.62e-38 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2101 01 36907358 36907783 Acco01g2101 01 36907358 36907783 ECH