Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2080 ATGAAGTCGAATCTGAATCCCAATGCTGATTCCTTCTACCCATCCGCCAAACCCAAACACACATTCACGGAACCATGCCATCAAGGTTACGTCGTCGTCTCGTCGCCGTCACTAGTTCCTCCACCACCATATTACCAGCAACCTTATTTCTATGGAGGCGCAAGAGGTGTCCATAATCTTCATCCTGGGAACGCCGTTGATGGTGCCAAGAAGCAAGATGATGCCTCTAAGAGGTTTTCAAAGCGTGGGTTTCTCCGTCATGTGATCACTGGTTATGGAAGAAGATTGGAGGCTCGCCGCACCAGAGGGTTCCGGCCACCACGGTTGCGCTGTTTGGCTTGCCGGCCAACCGGCGCAGCCAGTTGTGGTCGCCGGAATGAAGAAGCGACCCTGGGAAACTTTACCAGGGTTAAGAAGACAAAGCAACCTTTGGCTCCGGTGGAACGTGAGCGGAGTACCACCATCATGATCAGAAACATACCTAATAGATACACGCGTTCGATGTTGATCGACTTTTTGGACAACCATTGTCTGATTGAGAATCGGGAACTAGCAGATAAAGAAGAAGGTGAACGGTCAGAATCAGCCTTCGACCTCGTATATCTGCCCATCGACTTCGATACCAGGATGAACAAAGGGTACGGTTTCGTGAACTTCACGGATCCCGTGGCAGCTTGGAGGTTCTATGTGGCCAACAACAGTAAGAAATGGGAATTCTTTCAATCTAACAAGGTCCGTGACATCGTCGCTGCACGATTTCAGGGTAAGGATAAGTTAGTGGCGCACTTGAACTCGATGCAGTTTCCGGCGGGGTGGGACGAGGTTTTGCCGGTGTGTTTTAGCCCACCTCGTGATGGAACCATCAAGGGTAGCCAAAGGACTCTGGGGAAGCTAGAAATATCACTTTGCAATGAAAATAATAACTTTGTCAGTGGCGGCGGTGGCGGAGGAAGCTCAAGGTCAAGCTCCCAATGGAAGAAGAAGAAGAATACCCTTTCGCCAGAAGTTCAACACGCCGTTTCAGGCAAGTCAGCGCCTGAGGAGCTGCAAATTCGTCTCTATGTTGTGAGTGTAATGTGTTTTGATAAAAATCAAAGCCTCATACCGTCGAAGATTCTCACATTCTTATCAGAGTTCTGCCATCCAAAAATTTGCACGGTTATGGCGGCAAATGCGCCATCCAGCCATCTGCTACACATTCTTCGCTCTCAACCATCTTCGCTGTCTTCGATATCGCCATCTCCACCTTCCTTCGTTTCTTTTCTGAAACCTCTTCTGCTCTCATCCACCTTTATTTCTCCCACTACTATACCTAAATGCCTTCGAGATATCCAAGTTCTACCTCCTCGGAAATCTCTCTTTGCCTCTATCACTCACCTCTGTAATCCTTTTCTCTCTCACTCTCTCTCTTCACATGTGATTTCTCTTCCTCAGAGACATTGCGGTGCTGTGGGAGTTGGAGATTTGGTGGACATTTCTGAAGAGGACGATGAAGCAATTGAACCGTACAGTGAAGAAGAGAGTGAGATTGAGAACGAAGATAAGGATACCGAGATGAGTAGGGGTTCGGATTTGTCGCCGCTGGAGAGAAACAGGGAGGAGAGGTTGAAGTTACCGAGTCTCACTGTGAAGGAAAGGAAAGAACTCGCCTCTTACGCTCATAGCTTGGGGAAAAAGTTAAAAAGCCAGTTGGTGGGCAAGGCTGGCGTCACCCCTAATGTTGCGACCTCATTCATTGAGACACTTGAATCTAACGAGCTTCTCAAGATCAAAATACACCGGACTTGTCCAGGAGAGCTAGATGATGTGGTGAAGCAGCTGGAAGAAGCAACTGGTTCAGTGACTGTCGGTCAAATCGGGCGGACAGTGATTATATACAGGCCTAGTCTCACCAAATTGAAGGCAGAAGAGAAGAAGAAACAAGCTCGAAAAGTGTTTCTGAGGAGACAGCTAAAGCCAAAACTGAGTAAGGAACAGGGGTCAAAGTTTTCGCGGCGGAGATAA 2004 0.482 MKSNLNPNADSFYPSAKPKHTFTEPCHQGYVVVSSPSLVPPPPYYQQPYFYGGARGVHNLHPGNAVDGAKKQDDASKRFSKRGFLRHVITGYGRRLEARRTRGFRPPRLRCLACRPTGAASCGRRNEEATLGNFTRVKKTKQPLAPVERERSTTIMIRNIPNRYTRSMLIDFLDNHCLIENRELADKEEGERSESAFDLVYLPIDFDTRMNKGYGFVNFTDPVAAWRFYVANNSKKWEFFQSNKVRDIVAARFQGKDKLVAHLNSMQFPAGWDEVLPVCFSPPRDGTIKGSQRTLGKLEISLCNENNNFVSGGGGGGSSRSSSQWKKKKNTLSPEVQHAVSGKSAPEELQIRLYVVSVMCFDKNQSLIPSKILTFLSEFCHPKICTVMAANAPSSHLLHILRSQPSSLSSISPSPPSFVSFLKPLLLSSTFISPTTIPKCLRDIQVLPPRKSLFASITHLCNPFLSHSLSSHVISLPQRHCGAVGVGDLVDISEEDDEAIEPYSEEESEIENEDKDTEMSRGSDLSPLERNREERLKLPSLTVKERKELASYAHSLGKKLKSQLVGKAGVTPNVATSFIETLESNELLKIKIHRTCPGELDDVVKQLEEATGSVTVGQIGRTVIIYRPSLTKLKAEEKKKQARKVFLRRQLKPKLSKEQGSKFSRRR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2080 667 Pfam RNA recognition motif 2 153 263 IPR007201 -
Acco01g2080 667 Gene3D - 117 249 IPR012677 -
Acco01g2080 667 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 540 639 - -
Acco01g2080 667 SUPERFAMILY YhbY-like 541 629 IPR035920 -
Acco01g2080 667 MobiDBLite consensus disorder prediction 311 339 - -
Acco01g2080 667 MobiDBLite consensus disorder prediction 514 537 - -
Acco01g2080 667 Pfam CRS1 / YhbY (CRM) domain 541 627 IPR001890 GO:0003723
Acco01g2080 667 Coils Coil 630 650 - -
Acco01g2080 667 SMART CRS1_YhbY_2 541 627 IPR001890 GO:0003723
Acco01g2080 667 MobiDBLite consensus disorder prediction 497 537 - -
Acco01g2080 667 SUPERFAMILY RNA-binding domain, RBD 121 236 IPR035979 GO:0003676
Acco01g2080 667 MobiDBLite consensus disorder prediction 311 338 - -
Acco01g2080 667 Gene3D - 540 640 IPR035920 -
Acco01g2080 667 ProSiteProfiles CRM domain profile. 539 638 IPR001890 GO:0003723
Acco01g2080 667 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 390 666 - -
Acco01g2080 667 MobiDBLite consensus disorder prediction 497 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2080 Acco-ChrAcco01 36645413 36654391 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2080 01 36645413 36654391 Acco01g2080 01 36645413 36654391 ECH