Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2011 ATGCCTTCTCGAAGAAGAACCCTCTTGAAGGTCATCATTCTCGGTGATAGCGGAGTGGGGAAAACGTCATTGATGAATCAATATGTCAATAAGAAGTTTAGCAATCAGTACAAGGCAACCATTGGTGCGGACTTTTTAACCAAAGAAGTGCAGTTTGAAGATAGGCTTTTCACCTTACAGATTTGGGATACAGCGGGTCAGGAAAGATTCCAAAGCCTTGGAGTTGCTTTTTATCGTGGTGCTGATTGCTGTGTTCTTGTATATGATGTAAATTCGATGAAATCATTCGAAAACCTCAATCACTGGAGGGAGGAGTTTCTGATTCAGGCAAGCCCTTCGGATCCTGAGAATTTCCCATTTGTTGTTATAGGAAACAAGATAGATGTGGAAGGTGGAAACAATAGAGTGGTTTCAGAGAAGAAGGCTCGAGCTTGGTGTGCATCAAAAGGAAACATTCCATATTTTGAGACATCTGCCAAGGAAGGCATTAATGTAGAAGAAGCATTCCAATGCATAGCTAAGAATGCCTTGAAAAATGATGAAGAGGAAGAAATATACCTGCCAGACACAATTGATGTTGCAACTAACTCTCAGCAGCGTTCGACAGGATGTGAGTGCTAA 621 0.4155 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNHWREEFLIQASPSDPENFPFVVIGNKIDVEGGNNRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKNDEEEEIYLPDTIDVATNSQQRSTGCEC 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2011 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 185 IPR027417 -
Acco01g2011 206 SMART rab_sub_5 9 179 - -
Acco01g2011 206 Gene3D - 2 190 IPR027417 -
Acco01g2011 206 Pfam Ras family 10 177 IPR001806 GO:0003924|GO:0005525
Acco01g2011 206 SMART rho_sub_3 11 179 IPR001806 GO:0003924|GO:0005525
Acco01g2011 206 PRINTS Transforming protein P21 ras signature 9 30 - -
Acco01g2011 206 PRINTS Transforming protein P21 ras signature 154 176 - -
Acco01g2011 206 PRINTS Transforming protein P21 ras signature 116 129 - -
Acco01g2011 206 PRINTS Transforming protein P21 ras signature 32 48 - -
Acco01g2011 206 PRINTS Transforming protein P21 ras signature 50 72 - -
Acco01g2011 206 NCBIfam small GTP-binding protein domain 9 172 IPR005225 GO:0005525
Acco01g2011 206 CDD Rab7 9 182 - -
Acco01g2011 206 PANTHER RAB FAMILY 1 204 - -
Acco01g2011 206 ProSiteProfiles small GTPase Rab1 family profile. 3 206 - -
Acco01g2011 206 SMART ran_sub_2 14 205 - -
Acco01g2011 206 FunFam Ras-related protein Rab7 1 189 - -
Acco01g2011 206 ProSiteProfiles small GTPase Ras family profile. 3 206 IPR001806 GO:0003924|GO:0005525
Acco01g2011 206 SMART ras_sub_4 6 179 - -
Acco01g2011 206 ProSiteProfiles small GTPase Rho family profile. 2 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2011 Acco-ChrAcco01 35996081 35999957 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2011 01 35996081 35999957 Acco01g2011 01 35996081 35999957 ECH