Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0390 ATGAGGCTCGTGGTGCCTCTCCAAGGTGTGGTTCAAGGCAGAGGAGGCATTCTGCTTGGCTCTCTGATTCCCTGCGCTCTCTTCTACTTCCTCCAGCTCTATCTCAAACGGCAGCGTTCCGATGCACCTCCGCCGCCGTTCGGTGTTGAAGTGTCGTCTCTCGCGAATTCTCTTGCGAAACCTGATGATTCGCCTTATGACATTGGGTTGGAAAGAGTGGCTCGGGATTCTTATGATAGAATCAACAATCCAAATGGGATGATTGAACTGAGCTCGTCTAAGAGCAAGCTCTGCCTGGATCTAATTGAGAAGTGGTTATCAGAGAACATGAAGAAATCGCTAGTGGGGGATGATGATTTCACTCTCAGTGTTAATGGGCTTGCAACTTATCAGCCATTTGATGGATTGGAGGAATTGAAAATGGCCATATCAAATTTTATATCTCGAGTGATGGGAGGGATGGTGAAATTGGACCCATCAAATATGGTGCTAACTTCTGGAGCCACTCCTGCCATTGAGATTCTATCTTTCTGCTTAGCAAACCAGGGAGATGCTTTTCTTGTCCCAACACCTTATTATCCAGGCTTTGACAAGGATGTGACATGGAGAGCTAAAGTAAACCTAATACCTGTTCACTGCCAAAGCAATGACAATTTTGCTCTAAGTATCACTGCCCTTGAAAAAGCATTCTCTCAAGCTCAGAAACATCGATTCAAAGTCCGAGGAATTATCTTCTCCAACCCTGCAAATCTGGTCGGCAATCTGCTGACACGGGACATGCTCATAAGTCTTATGCACTTTGCAGAAAAGAATAACATCCATATCATTGCTGATGAAGTACTTGCAGGATCAGTATATGAAAGTGACAAGTTTGTGAGCATAGCTGAAGTTCTTGATTCAGAAGGTCTGAATAAGAACCGAGTTCATATAATATATGGCCTCTCAAAAGGCCTCTCACTTGCAGGCTTTAGAGTTGGGGTCATATATTCATCTCACAACACTGTTGTGGCTGCTGCTAGGAAGCTAAGTAGGTTTTCTTCTTTATCTGCTCCAACACAGAGGTTACTTATTTCAATGCTTTCAGATAGAAAATTTATTCAGAAGTATTTTGAAACTAAACAGAAGAGAATGAGACAAGTGCGCCATGTACTTGAGACTGGTTTGAGTGGTCTAGGAATCAAGTGTGGAAAGATCAATGCTGGTTTCTACTGTTGGGCTGATATGAGAGGATTGTTAAGGAAACCTCATAGTGAGGAAAGGGAGCTTGAGTTATGGAACAAGTTTATAGATCTTTCTAAGATCAATATACTTCCTGGATCAGCCTGTCATTGTCATGAACCAGGATGGTTTGGAATTTGTTTTAGTGCACTAACTTCAGAAAACATTCCTGTAATTGTTGAAAGGATTAGGAAAGTTGTTGAAACTTGTAAATCTTCCTGTTGA 1443 0.4227 MRLVVPLQGVVQGRGGILLGSLIPCALFYFLQLYLKRQRSDAPPPPFGVEVSSLANSLAKPDDSPYDIGLERVARDSYDRINNPNGMIELSSSKSKLCLDLIEKWLSENMKKSLVGDDDFTLSVNGLATYQPFDGLEELKMAISNFISRVMGGMVKLDPSNMVLTSGATPAIEILSFCLANQGDAFLVPTPYYPGFDKDVTWRAKVNLIPVHCQSNDNFALSITALEKAFSQAQKHRFKVRGIIFSNPANLVGNLLTRDMLISLMHFAEKNNIHIIADEVLAGSVYESDKFVSIAEVLDSEGLNKNRVHIIYGLSKGLSLAGFRVGVIYSSHNTVVAAARKLSRFSSLSAPTQRLLISMLSDRKFIQKYFETKQKRMRQVRHVLETGLSGLGIKCGKINAGFYCWADMRGLLRKPHSEERELELWNKFIDLSKINILPGSACHCHEPGWFGICFSALTSENIPVIVERIRKVVETCKSSC 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0390 480 Gene3D Aspartate Aminotransferase, domain 1 76 467 IPR015422 GO:0003824
Acco01g0390 480 CDD AAT_like 130 471 - -
Acco01g0390 480 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 51 474 - -
Acco01g0390 480 SUPERFAMILY PLP-dependent transferases 71 474 IPR015424 -
Acco01g0390 480 Gene3D - 110 362 IPR015421 GO:0003824
Acco01g0390 480 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 313 326 IPR004838 GO:0003824|GO:0009058|GO:0030170
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 307 331 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 339 362 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 124 140 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 161 181 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 273 296 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 90 116 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 183 204 - -
Acco01g0390 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 237 261 - -
Acco01g0390 480 Pfam Aminotransferase class I and II 120 469 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0390 Acco-ChrAcco01 4653539 4656061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0390 01 4653539 4656061 Acco01g0390 01 4653539 4656061 ECH