Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0195 ATGTCTCAGGTGGTGGTCACGCGCTCCATTCACAGCTGCTTCCTTTGCCCCAACCTTGGATCTGCTCAACCCAGAGCTGAAAACTTGTTAAAGCCTTCTACCTTTTCTTTCGATGCGTTCTCACCTAAGAAGACTTCCAAAGCTGGTTTTCACACAAGTTCATGCCAGATCGTTGTAAGGAAAGCTGCTCTTCCACCTACTGAAGTAGTCCCCGTATCACCCGAGGATGAGATTGAGGAGCAGTTGCAGCATTTGCGTGTAATGCCGCAATTAGGTGACACTTCAGCTGGTATGTGGTCGAAGCCCACTGTAAGACGGAAGACAAAGATTGTTTGTACGATTGGTCCTTCTACTAATACTCGGGAAATGATTTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGCCTCAATATGTCTCATGGGGACCACGCTTCCCATCAGAAAGTTATTGACTTGGTTAAGGAATATAATGCACAATCTAAGGATAATGTGATCTCCATTATGCTTGACACCAAGGGACCTGAGGTTAGGAGTGGGGATTTGCCACAACCAATCACGTTGACACCTGGTCAGGAATTCACTTTTACAATTCAGAGGGGTGTTGGAACTTCAGATTGTGTCAGTGTGAACTATGATGATTTTGTCAATGATGTGGAAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGGTGGTTAAATCAAAGACAGCTGTTTCAGTAAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAATCAAGGCGGCATTTGAATGTTCGAGGGAAAAGTGCAACACTACCTTCCATTACTGAGAAGGACTGGGATGACATCAAATTTGGAGTAGATAACCAAGTTGACTTTTATGCCGTTTCATTTGTTAAGGATGCTCAAGTGGTTCACGAATTGAAGAATTATTTGAAAAGCTGTGGTGCTGATATACATATCATCGTGAAGATTGAAAGTGCAGACTCTATACCAAACTTGCACTCAATCATTACAGCTTCTGATGGGGCAATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTTCCTATTGAGGAGGTTCCACTTTTACAGGAAGAGATAATCAATATTTGTCGAAGCATGGGGAAGGCTGTTATTGTAGCAACTAATATGCTGGAAAGCATGATTGTACACCCTACACCAACCAGAGCAGAAGTATCAGATATTGCAATTGCTGTTCGTGAAGGTTCCGATGGAATCATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTGAAGGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCAACCATTCCAGGTGGTCAAATGCCACCTAATCTTGGCCAAGTATTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCGACAATGATGTCTAATACCCTTGGAACCTCTACTGTAGTCTTCACTAGATCAGGTTTTATGGCTATCCTACTGAGCCACTATCGACCTTCTGGCACTATATTTGCTTTCACTGACAATAAGAGGACACAACAGCGGCTGGCTTTGTATCAAGGGGTGTGCCCCATTTTTATGGAATTTTCTGATGATGCGGAGGAGACTTTTGCTAAAGCGCTAGGTTTACTCCAGAAGCAAGGAATGATAAAGGAAGGAGAAGAAGTGGCCATTGTACAGAGTGGGAGACAGCCCATATGGAGGTCCCAGTCCACTCACAACATCCAGGTCCGGCAAGTGTAA 1728 0.4433 MSQVVVTRSIHSCFLCPNLGSAQPRAENLLKPSTFSFDAFSPKKTSKAGFHTSSCQIVVRKAALPPTEVVPVSPEDEIEEQLQHLRVMPQLGDTSAGMWSKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPITLTPGQEFTFTIQRGVGTSDCVSVNYDDFVNDVEVGDMLLVDGGMMSLVVKSKTAVSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHIIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDNKRTQQRLALYQGVCPIFMEFSDDAEETFAKALGLLQKQGMIKEGEEVAIVQSGRQPIWRSQSTHNIQVRQV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0195 575 FunFam Pyruvate kinase 176 269 - -
Acco01g0195 575 NCBIfam pyruvate kinase 106 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Acco01g0195 575 Gene3D - 108 433 IPR040442 -
Acco01g0195 575 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Acco01g0195 575 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Acco01g0195 575 PANTHER PYRUVATE KINASE 88 553 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Acco01g0195 575 Gene3D - 448 575 IPR036918 -
Acco01g0195 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Acco01g0195 575 Pfam Pyruvate kinase, alpha/beta domain 463 556 IPR015795 -
Acco01g0195 575 FunFam Pyruvate kinase 271 436 - -
Acco01g0195 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Acco01g0195 575 FunFam Pyruvate kinase 437 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0195 Acco-ChrAcco01 2185536 2192369 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0195 01 2185536 2192369 Acco01g0195 01 2185536 2192369 ECH