Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0160 ATGGGCCTTGGGCCCGCTTATTTACCCCAAGGCGTGAGAACGAGGGGGGTTCACTCAGGAAGAATGGCTACAGAGGAAGAGAGCGCGGTAAAGGAGCCGTTGGATCTCATCAGGCTCAGCCTGGACGAGCGTATCTACGTCAAGCTTCGTTCTGACAGAGAGCTTCGCGGCAAGCTTCATGCTTATGATCAGCATCTAAATATGATTCTTGGCGATGTTGAAGAAGTTGTTACTACTGTTGAAATTGATGATGAGACATATGAAGAGATTGTCCGGACTACCAAGCGGACGGTTCCTTTCCTGTTTGTAAGGGGAGATGGGGTGATATTAGTTTCCCCACCACTGAGGACTGCGTGA 357 0.4986 MGLGPAYLPQGVRTRGVHSGRMATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0160 118 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 22 117 IPR040002 GO:0003723
Acco01g0160 118 FunFam U6 snRNA-associated Sm-like protein LSm3 23 115 - -
Acco01g0160 118 Pfam LSM domain 37 113 IPR001163 -
Acco01g0160 118 SMART Sm3 35 113 IPR001163 -
Acco01g0160 118 ProSiteProfiles Sm domain profile. 32 117 IPR047575 GO:0003723
Acco01g0160 118 Gene3D - 23 115 - -
Acco01g0160 118 SUPERFAMILY Sm-like ribonucleoproteins 32 114 IPR010920 -
Acco01g0160 118 CDD LSm3 32 113 IPR034105 GO:0000398|GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0160 01 1618974 1621033 Acco01g0160 01 1618974 1621033 ECH