Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1398 ATGAATATTCAGGCACATATGTCAGGACAAATGTCAGGGCAGGTACCTAATCAAGCTGGAAGTCAGTTGCCGGGATTGCCACAGCAAAATGGAAGTTCTCTCCCTTCCCAGATTCAAAATCTAGGTGGTCATCGCAATACAGGCAATATGGATCCCGACATTGTGAGAGCACGAAAAAGCATGCAAGTCAAAATCTATGAATATCTTACACAACGACAGTCATCTCCTTACGATCTTCAACCGAAGAAGTTGGCAGATATTGTTAGACGCTTAGACGATGTTTTATTCAGGAGTGCTGCCACAAAGGAGGACTATGCTAATCTGGATACCTTGGAGAGCCGTTTACATGGTTCGATTAAAAGCTTGTCTCTGAGTAGTCACAACCAACAATTTCCACAAGCAGTTAATTCTTCCTCTGCTGTTAGTACAATGATACCAACACCTGGTATGTCACACAGCGGGAGCTCAAATTTAATGGTTACATCTTCTGTAGATACTTCCATGATTGCTGCTAGTGCATGTAATAGCATAGCACCTACAACTGTCAACACTGGGAGCCTGTTGCCAGCTGGCGGTGGGTCCTCAGTTGGCATACACAGCAGTTCATTCAATTCATCTGATGGATCCCTGTGTAATGGATATCAGCAATCAACATCCAGTTTTTCCATTGGCTCTGGTGGAAACAGCATGATGTCTTCAATGAGTGGGCAAAGAATCACAAGCCAAATGATTCCTACGCCTGGATTTAATAGTAATAATAATCAGTCTTACATGAATTCAGAATCTTCCAATAATGGGGGTGGGTTTTCGAGTGTTGAATCCACAATGGTATCACAACCTCAACAACAAAAGCAGCATGTTGGTGGTCAAAACATCCGTATATTGCACAACCTTGGCAGTCAAAGGGGTAGTGGAATTAGGTCCGGTTTGCAGCAGAAAACTTATGGTTTTTCAAATGGGGCTTTAAATGGTGGGTTTATTGGGAACAATATGCAACTGGTGAATGGACCCAGCACTTCTGATGGCTATCTGTCTGGCACACTGTATGGTGATTCATCCAAACCTTTACAGCAGCAGTTTGATCAACATCAGCGACCCCTTATTCAGGGTGATGGATATGGGATGAACGCTGCTGATCCTTCTGGGTCTGCAAACTTCTATAATACTGTAACATCAGCTGGATCAATGATGAATACTCAAAATTTGAATCCAGTTAGCTTGCAGTCGATGTCCAAAACCAACTCCACTTTGATACCCAATCAGTCGAATTTGCACAATGCACAACAGGCTGTGCATATGAAGCCTCAATCGGTCAGTCAATCAGAAAAGGTGAACTTCCAATCTCCACTCTCATCGAGGGAAAACCTCTTACAATCTCATCAACAGCAACAATTTCAGCAACAACCTCATCAGTTTCAACAACAGTTTGTTCCACATCAACGTCAACAGAAGCCACCAAGTCAGCAGCACCAGATTTTGATAAAGAATGATGCTTTTGGTCAGCCTCAGCTGACATCTGATCTAAGCAGTCAAGTAAAGGCTGAGCTTGGAGGGGAACACCATAACGAAATTCTGAATTCACAAGTTTCTGACCAGTTTCAACTTTCTGAGTTGCAGAATCAATTCCAGCAGAACTCTTCTGATGACCATTCTAGAGGTGCTCAGTTGCACTCTCTACCATCTGGAACGCAGGAAATGTGTTCATCAGTGTCTCAAAATTCACAACAAATTCAACAGTTGTTACATCCACAGCAGTTGATTGCGGAGTCTCAAAATGATTTTAGCTGCCTATCTATTGGAGAACAATCAGAATCAGTTCTGCATGGTCAATGGCATCCTCAATCACAAGGCAGGCCTCAAATATCAGGCAACTTGTCGCATGATCAGCATGTCCAAGAAGAGTTCCGTCAGCGAATAACCAGGCACGATGAAGCCCAGCGCAATAATTTGTCTTCAGAGGGATCTATCATTGGTAAAACTGTTACTCCCCGAAGCACAGGGGAGTCTCAATTAAGTGCTGCTGCCTGTAAATCGGCAAACAGTAACCGGGAACGGCAGTTTAAGAATCAACAGAGGTGGCTTTTGTTCTTGCGACATGCTCGTCGTTGTGCAGCCCCAGAAGGAAAATGTCAAGATGTTAATTGCATTACTGTTCAAAAGTTGTGGAGGCATATGGACAGATGTAATCTGCCACAATGTTCATTTCCCCGTTGCCAGCATACCAGGGTATTGCTTCATCACCACAAACATTGCAGGGACCCAGGATGTCCTGTTTGTATTCCTGTCAAGAATTATTTGGACTTACAACTGAGAGCACGCACTCGTCCAGGTTCTGATTCTGGCTTGCCAACTCCTATAGATGGATCCTGTAAATCCCATGATACTGTAGAGACAGCTAGATTGACTTCAAAGGCTTCTTCAGTTGTTGAAACCTCTGAAGATCTGCAGCCTTCATCAAAACGCATGAAAACAGAGCAGCCCTCCCAATCTCTTCTTCCTGAAAGTGAAAGTTCTGCAGTATTGGTTCCTGTAATTACTGAATCTCATGTTCCACAGGATGTACAACGCCAAGAATACCGACATGGTGATGTTAGTATGCCAATTAAATCTGAGTTTACAGAAGTGAAGATGGAAGTTCCTGTGAACTCTGGGCAGGGAAGTCCTAAGATTAGTGAACTAAAGAAGGATAATTTGGATGATATCTACAACCAAAGGCCTGATAGTGAACCTATTATATATGATGAGTCTGCTGGTTTTGCTAAGGAAGAAAATGTTAAACTTGAGAAAGAGAATGATCAGGCTAGGCAGGAAAATGTGACACAGCCTTCTGAAAGTATTGGAACCAAATCTGGGAAGCCAAAAATAAAGGGGGTTTCATTGACTGAACTGTTCACGCCAGAGCAAATCAGGGCCCATATTACAGGTCTCAGGCAGTGGGTTGGACAGAGCAAGGCCAAGGCAGAAAAGAATCAAGCAATGGAGCGTTCGATGAGTGAGAACTCTTGTCAGCTGTGTGCAGTTGAGAAGCTTACTTTTGAACCTCCACCTATATATTGCTCACCATGTGGTGCTCGTATTAAGAGAAATGCAATGTATTATACCATGGGAACTGGTGATACGCGACATTATTTCTGTATACCATGCTATAATGAAGCCCGAGGAGACAGTGTCGTGGTTGATGGGACTTCTCTTCCCAAAGCAAGGCTGGAGAAGAAGAAAAATGATGAGGAGACTGAAGAATGGTGGGTTCAATGTGACAAATGTGAAGCTTGGCAACATCAAATTTGTGCCTTGTTCAATGGTCGGAGGAATGATGGTGGGCAGGCTGAATATACTTGCCCTAATTGCTATATAACAGAGATTGAGAGAGGAGAGCGTAAACCATTACCTCAGAGTGCTGTTCTTGGGGCTAAAGATTTGCCAAGGACAATTCTTAGTGACCACATAGAACAGCGGTTATTTAAAAGACTCAAGCAGGAAAGGCAAGAGAGGGCAAGGCTTCAAGGGAAAGGTTTTGATGAGGTTGCTGGAGCTGAAGCACTTGTGATTAGAGTTGTCTCATCAGTTGACAAAAAGTTGGAAGTGAAGCAGCGGTTCCTTGAAATTTTTCAAGAAGAGAATTACCCAACGGAATTCCCTTATAAATCTAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGAGTAGAAGTATGCTTATTTGGGATGTATGTTCAAGAATTTGGATCAGAATGTCTATTCCCAAATCAACGTCGTGTTTATCTCTCATATCTGGATTCTGTGAAGTACTTCAGGCCTGAGATTAAATCAGTGACTGGGGAGGCTCTCCGTACATTTGTTTACCATGAAATTCTGATTGGATATCTCGAATACTGTAAGAAGCGGGGTTTCACAAGTTGCTATATATGGGCTTGTCCTCCTTTGAAGGGTGAAGACTATATATTGTATTGCCATCCTGAAATTCAGAAAACACCAAAATCTGATAAACTCAGAGAATGGTATTTATCAATGTTAAGAAAAGCTGCCAAGGAAAATATTGTGGTCGACCTTACTAATTTATATGACCATTTCTTTGTATCTACTGGTGAATGTAAGTCTAAGGTAACTGCAGCTAGGCTTCCGTATTTCGATGGTGATTACTGGCCTGGTGCTGCGGAGGATATGATCTATCAGCTTCAACAAGAAGAAGATGGCAGAAAACTACATAAGAAAGGAACTACCAAAAAGACTATAACAAAAAGGGCTCTAAAGGCATCCGGTCAATCTGATCTTTCTGGCAATGCTTCAAAGGATTTACTACTAATGCATAAACTTGGTGAAACCATAAGCCCAATGAAGGAAGATTTTATAATGGTTCACTTGCAACATGCATGTACTCATTGTTGTCATCTGATGGTATCTGGAAACCGTTGGGTTTGCCACCAGTGCAAGAATTTTCAGCTTTGTGATAAGTGTTATGAAGCAGAGCAAAAACTTGAAGAGAGAGAGAGACATCCTGTCAATCACAGGGACAAACATCTACTCCATCCAGTTGAAATCAACGACGTACCTTCAGATACTAAGGATAAGGATGAGATTCTGGAGAGTGAATTCTTTGACACCAGACAGGCATTTCTGAGTCTTTGTCAAGGAAATCATTATCAATATGATACCCTACGCCGGGCTAAACATTCCTCTATGATGGTCCTTTACCATCTTCACAATCCAACTGCACCTGCTTTTGTGACTACATGTAATATATGTCACCTTGACATTGAAGCTGGTCAAGGTTGGCGTTGTGAGGTTTGCCCCGATTATGATGTGTGCAACGCATGTTATCAAAAGGATGGGGGTATTGACCATCCACATAAATTGACCAATCATCCGTCCATGGCCGATCGTGATGCACAGAATAAAGAAGCAAGGCAGCTACGAGTTTTACAGCTAAGAAAAATGCTTGATCTACTGGTGCATGCATCTCAATGCCGTTCTCCACATTGTCAATATCCAAACTGTCGCAAAGTGAAGGGCCTTTTCCGCCATGGGATACAATGCAAAACACGGGCGTCTGGTGGTTGTCTTCTCTGCAAGAAAATGTGGTATCTCCTTCAACTTCATGCTCGAGCTTGCAAGGAATCTGAATGCCATGTACCACGTTGCAGAGATCTGAAGGAGCATTTGAGGAGGCTGCAGCAGCAGTCTGATTCTAGGCGAAGAGCTGCTGTGATGGAGATGATGAGACAGAGAGCTGCAGAGGTTGCTGGTAATGCTGGATGA 5253 0.4276 MNIQAHMSGQMSGQVPNQAGSQLPGLPQQNGSSLPSQIQNLGGHRNTGNMDPDIVRARKSMQVKIYEYLTQRQSSPYDLQPKKLADIVRRLDDVLFRSAATKEDYANLDTLESRLHGSIKSLSLSSHNQQFPQAVNSSSAVSTMIPTPGMSHSGSSNLMVTSSVDTSMIAASACNSIAPTTVNTGSLLPAGGGSSVGIHSSSFNSSDGSLCNGYQQSTSSFSIGSGGNSMMSSMSGQRITSQMIPTPGFNSNNNQSYMNSESSNNGGGFSSVESTMVSQPQQQKQHVGGQNIRILHNLGSQRGSGIRSGLQQKTYGFSNGALNGGFIGNNMQLVNGPSTSDGYLSGTLYGDSSKPLQQQFDQHQRPLIQGDGYGMNAADPSGSANFYNTVTSAGSMMNTQNLNPVSLQSMSKTNSTLIPNQSNLHNAQQAVHMKPQSVSQSEKVNFQSPLSSRENLLQSHQQQQFQQQPHQFQQQFVPHQRQQKPPSQQHQILIKNDAFGQPQLTSDLSSQVKAELGGEHHNEILNSQVSDQFQLSELQNQFQQNSSDDHSRGAQLHSLPSGTQEMCSSVSQNSQQIQQLLHPQQLIAESQNDFSCLSIGEQSESVLHGQWHPQSQGRPQISGNLSHDQHVQEEFRQRITRHDEAQRNNLSSEGSIIGKTVTPRSTGESQLSAAACKSANSNRERQFKNQQRWLLFLRHARRCAAPEGKCQDVNCITVQKLWRHMDRCNLPQCSFPRCQHTRVLLHHHKHCRDPGCPVCIPVKNYLDLQLRARTRPGSDSGLPTPIDGSCKSHDTVETARLTSKASSVVETSEDLQPSSKRMKTEQPSQSLLPESESSAVLVPVITESHVPQDVQRQEYRHGDVSMPIKSEFTEVKMEVPVNSGQGSPKISELKKDNLDDIYNQRPDSEPIIYDESAGFAKEENVKLEKENDQARQENVTQPSESIGTKSGKPKIKGVSLTELFTPEQIRAHITGLRQWVGQSKAKAEKNQAMERSMSENSCQLCAVEKLTFEPPPIYCSPCGARIKRNAMYYTMGTGDTRHYFCIPCYNEARGDSVVVDGTSLPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYITEIERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERQERARLQGKGFDEVAGAEALVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECLFPNQRRVYLSYLDSVKYFRPEIKSVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDLTNLYDHFFVSTGECKSKVTAARLPYFDGDYWPGAAEDMIYQLQQEEDGRKLHKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACTHCCHLMVSGNRWVCHQCKNFQLCDKCYEAEQKLEERERHPVNHRDKHLLHPVEINDVPSDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIEAGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCLLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVAGNAG* 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1398 1750 Gene3D - 1571 1623 IPR043145 -
Vvi9g1398 1750 Gene3D TAZ domain 678 779 IPR035898 -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 925 953 - -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 540 571 - -
Vvi9g1398 1750 ProSitePatterns Zinc finger ZZ-type signature. 1577 1604 IPR000433 GO:0008270
Vvi9g1398 1750 FunFam Histone acetyltransferase HAC1 1571 1622 - -
Vvi9g1398 1750 SUPERFAMILY TAZ domain 1634 1717 IPR035898 -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 1 34 - -
Vvi9g1398 1750 SUPERFAMILY FYVE/PHD zinc finger 1078 1118 IPR011011 -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 607 628 - -
Vvi9g1398 1750 Pfam Histone acetylation protein 1178 1390 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vvi9g1398 1750 SUPERFAMILY TAZ domain 680 766 IPR035898 -
Vvi9g1398 1750 FunFam Histone acetyltransferase HAC1-like protein 1629 1746 - -
Vvi9g1398 1750 CDD PHD_HAC_like 1044 1116 - -
Vvi9g1398 1750 Coils Coil 1150 1170 - -
Vvi9g1398 1750 Gene3D TAZ domain 1629 1745 IPR035898 -
Vvi9g1398 1750 PANTHER CBP/P300-RELATED 83 1741 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vvi9g1398 1750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1069 1117 IPR013083 -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 801 836 - -
Vvi9g1398 1750 Pfam PHD-finger 1075 1117 IPR019787 -
Vvi9g1398 1750 ProSiteProfiles Zinc finger TAZ-type profile. 681 762 IPR000197 -
Vvi9g1398 1750 SMART TAZ_2 684 762 IPR000197 -
Vvi9g1398 1750 SMART TAZ_2 1635 1713 IPR000197 -
Vvi9g1398 1750 ProSitePatterns Zinc finger PHD-type signature. 1045 1116 IPR019786 -
Vvi9g1398 1750 Gene3D - 1448 1509 IPR043145 -
Vvi9g1398 1750 ProSiteProfiles Zinc finger TAZ-type profile. 1632 1715 IPR000197 -
Vvi9g1398 1750 SMART KAT11_2 1167 1464 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vvi9g1398 1750 ProSiteProfiles Zinc finger ZZ-type profile. 1572 1625 IPR000433 GO:0008270
Vvi9g1398 1750 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1134 1570 IPR031162 GO:0004402
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 774 793 - -
Vvi9g1398 1750 Pfam TAZ zinc finger 1642 1712 IPR000197 -
Vvi9g1398 1750 Pfam TAZ zinc finger 691 759 IPR000197 -
Vvi9g1398 1750 SUPERFAMILY RING/U-box 1553 1621 - -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 607 675 - -
Vvi9g1398 1750 SUPERFAMILY RING/U-box 1432 1517 - -
Vvi9g1398 1750 Pfam Zinc finger, ZZ type 1574 1613 IPR000433 GO:0008270
Vvi9g1398 1750 ProSiteProfiles Zinc finger ZZ-type profile. 1452 1515 IPR000433 GO:0008270
Vvi9g1398 1750 SMART zz_5 1571 1617 IPR000433 GO:0008270
Vvi9g1398 1750 SMART zz_5 1451 1495 IPR000433 GO:0008270
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 426 489 - -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 649 675 - -
Vvi9g1398 1750 FunFam Histone acetyltransferase of the CBP family 12 1448 1507 - -
Vvi9g1398 1750 Coils Coil 917 937 - -
Vvi9g1398 1750 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1398 Vvi-Chr9 22850395 22864453 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vvi9g1398 HAT_KAT11 1.7e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1398 K04498 - vvi:100251243 3422.48