Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1394 ATGGGTGGTGGAGGAGACTTCATGGTAACAGTGAGCAGGAAGGAGGTAGTGGCGGCTGCGCTGCCTGTGCAGGAGTACTGGCTGCCACAATCTAACCTGGACTTGCTTTTGCCTCCAGTAGATGTGGGTGTGTTTTTCTGTTACAAGAAGCCACATGGGAGTGGGAATGGAGGTGATGAATTGAGGTTTGGGTCCATGGTTAGGGTTGTGAAGGAGGCCTTGGCCCAAGCACTGGTGTCCTATTATGCATTTGCAGGCGAGGTTGTGAGTAACTCAGTGGGTGAGCCTGAGCTTCTATGCAACAACCGCGGGGTGGATTTCACAGAGGCCTATGCGGATGTGCAACTACAAGACCTCAATTTGTATAACCCTGATGACAGCATTGAAGGCAAGCTTGTCCCTAAGAAGAAGAATGGAGTCCTCTCAGTACAGGTGACTGAGCTCAAATGTGGCGGAGCTGTGGTGGGCTGTACATTTGATCATCGCATAGCAGACGCCTATTCTGCCAATTTGTTCATCGTTTCATGGGCTGAGATGGCTCAGTCCAAGCCATTATCTGTAATACCATCTTTCAGGCGCTCTCTTCTCAACCCTCGACGTCCAGGCTCCTACCATCCGTCCCTCGATGAGATGTATGTCCCCATCTCAGCCTTACCTCCTCCCAAGGCTCCGCAGCCCGGTGCTGAGCATCTCATAAGCCGCCTTTACTATGTCAGTGCTGAACAGCTCAGTCTGCTCCAAACACTAGCCAGCAGCGGCGGAATCCGCAAGAGGACTAAGCTAGAGTCTCTCAGTGCATTTTTATGGAAGATGATAGCCAAAAGTGCTGTCATGGAGAATGCAAACAAAAAGATATGCAAGATGGGCATTGTGGTAGATGGAAGAGGGCGGTTAAGCAGTGGGGATGAAGATAAAACGGCTCTGATGGCCACTTACTTTGGAAATGTACTGTCCATTCCCTTTGGTGAGAAGATAATTTGTGACCTGAAAGAGCAACCATTGAGTTGGGTGGCAGATGCAGTGCATGACTTCCTAGAAAGGGCAGTGACCAAGGAGCATTTCTTGGGCCTCATAGATTGGGTGGAGACTCACCGTCCGGAGCCGGCTTTAGCAAAAATATACTGCAGTGGCAGTAGCGATGGACCAGCATTTGTGGTGTCATCAGGGCAGAGATTCCCGGCGTCAAAGGTGGACTTCGGGTGGGGGAGACCGGCTCTGGGGTCATACCATTTTCCATGGGGTGGGGATGCTGGGTACGTGATGCCAATGCCGAGTCCGGCAAGAGATGGCGACTGGGTGGTGTACATGCATCTGCTGAATGGCCAGATAGAGTTGATTGAGAATCAGGGAGCTCATATCTTTAGGCCTTTAACATCCGATTATCTTAAATTAGCTGACTTCCCTCACCTAAGTTAA 1416 0.5064 MGGGGDFMVTVSRKEVVAAALPVQEYWLPQSNLDLLLPPVDVGVFFCYKKPHGSGNGGDELRFGSMVRVVKEALAQALVSYYAFAGEVVSNSVGEPELLCNNRGVDFTEAYADVQLQDLNLYNPDDSIEGKLVPKKKNGVLSVQVTELKCGGAVVGCTFDHRIADAYSANLFIVSWAEMAQSKPLSVIPSFRRSLLNPRRPGSYHPSLDEMYVPISALPPPKAPQPGAEHLISRLYYVSAEQLSLLQTLASSGGIRKRTKLESLSAFLWKMIAKSAVMENANKKICKMGIVVDGRGRLSSGDEDKTALMATYFGNVLSIPFGEKIICDLKEQPLSWVADAVHDFLERAVTKEHFLGLIDWVETHRPEPALAKIYCSGSSDGPAFVVSSGQRFPASKVDFGWGRPALGSYHFPWGGDAGYVMPMPSPARDGDWVVYMHLLNGQIELIENQGAHIFRPLTSDYLKLADFPHLS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1394 471 Gene3D - 6 210 IPR023213 -
Vvi9g1394 471 Pfam Transferase family 7 451 - -
Vvi9g1394 471 Gene3D - 216 448 IPR023213 -
Vvi9g1394 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1394 Vvi-Chr9 22794596 22798047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1394 18 447 Monolignol Biosynthesis Gene Families AT5G48930 28.798 1.24e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1394 - - vvi:100265101 952.199