Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1393 ATGGGCAGTGGAGGAGATTTCACTGTAACTGTGACCAGGAAAGATATAGTTGCAGCGGTGCTGCCTATTCTGGAGTATTGGCTACCACTCTCCAACCTGGATTTGCTTTTGCCTCCACTAGATGTTAGCGTGTTTTTATGTTACAAGAAGCCCCATGAGAGTGTCAATGGAGGTGAAAACTTCACCTTTGGGTCCATGGTCAGGGTTCTGAAGGAAGCCATGGCCCAAGCACTGGTGCCCTACTATGCTTTTGGAGGAGAAGTTTTGTCGAACTCATTGGGTGAGCCTGAGCTTCTCTGCAATAACCATGGGGTTGATTTCCTGGAGGCTTACGCAGATGTAAAGCTAAAAGACCTCGACTTGTATAACCCCGACGAAAGTATTGAAGGCAAGCTTGTCCCTAAGAAAAAGCATGGCGTTCTCTCTGTCCAGGTAACTGAGCTCAAATGTGGTGGAGTTGTGGTTGCCTGTACGTTTGATCATCGGATAGCAGATGCATATTCTACCAATATGTTCTTAGTTTCATGGGCTGAGATCGCTCAATGCAAGCCATTATCCGTAATACCGTCTTTTCGGCGCTCTCTCCTCAACCCTCGACATCCAGGATCCTATGATCCGTCCATTGACAACATGTACATCCCCTACTCAGCCTTACCTCCTCCCAGAGCTCAGCAGCGCCAAGCTGATCCTCTCATAAGCCGCCTTTTCTATGTCATGGCTGAACAGATCATTCTACTCCAAACACTAGCCATCAGCAAGGGTAGCTCCTACAGGAGGACTAAACTAGAGTCTCTCACTGCATTTCTGTGGAAGATGGTGGCCAAAAGTGCTGCAGTGGTAGGAAATTCAAACAAACAGATATGCAAGATGGGCATTGTGGTGGACGGAAGACAGAGGTTAAGCATTGGAGACGAGGATAAAGAAACAGCCATGGCATCTTACATTGGAAATGTGCTGTCCATCGCCATTGGTGAGAAGACAATACATGAGTTGAAAGAGAAACCATTGAGTTGGGTGGCAGATGCGGTTCATGACTATCTGGAAGGGGCAGCGACAAAGGAGCTTTTCTTGGGGCTGATAGATTGGGTGGAGGCTCACCGGCCAGAACCGGCTTTAACAAAGATATACTGCAGTAGCAGTAGCGATGAACCAGCATTCGTGATGTCATCAGGGCAGAGATTCCCGGTGTCAAAGGTGGATTTCGGGTGGGGTAGGCCGGCTCTGGGATCATACCATTTTCCATGGGGAGGGGAAACTGGGTACGTGATGCCAATGCCAAGTCCGGCCAGAGATGGTGACTGGGTGGTGTACATGCACCTCTTGAAAGGCCAGATGGATTTGATTGAGAAGGAAGCTGCTCATATTTTTAGGCCTTTAGCATCTGAGTATCTTAAATTATAG 1401 0.4811 MGSGGDFTVTVTRKDIVAAVLPILEYWLPLSNLDLLLPPLDVSVFLCYKKPHESVNGGENFTFGSMVRVLKEAMAQALVPYYAFGGEVLSNSLGEPELLCNNHGVDFLEAYADVKLKDLDLYNPDESIEGKLVPKKKHGVLSVQVTELKCGGVVVACTFDHRIADAYSTNMFLVSWAEIAQCKPLSVIPSFRRSLLNPRHPGSYDPSIDNMYIPYSALPPPRAQQRQADPLISRLFYVMAEQIILLQTLAISKGSSYRRTKLESLTAFLWKMVAKSAAVVGNSNKQICKMGIVVDGRQRLSIGDEDKETAMASYIGNVLSIAIGEKTIHELKEKPLSWVADAVHDYLEGAATKELFLGLIDWVEAHRPEPALTKIYCSSSSDEPAFVMSSGQRFPVSKVDFGWGRPALGSYHFPWGGETGYVMPMPSPARDGDWVVYMHLLKGQMDLIEKEAAHIFRPLASEYLKL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1393 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 28 427 - -
Vvi9g1393 466 Pfam Transferase family 8 454 - -
Vvi9g1393 466 Gene3D - 216 451 IPR023213 -
Vvi9g1393 466 Gene3D - 6 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1393 Vvi-Chr9 22785961 22787669 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1393 18 450 Monolignol Biosynthesis Gene Families AT5G48930 28.027 5.24e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1393 - - vvi:100242815 918.302