Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1390 ATGGGTGGTGGAGGAAAGTACTTCACGGTGACTGTGACCAGGAAAGAGCTAGTGGCAGCGGAGGTGCCAATGCAGGAGCATTGGCTGCCGCTATCTAACCTCGATCTGCTTTTGCCTCCTATAGATGTGAGTATGTTTTTCTGTTACAAGAAGCCCCATCAGAATGCTAATGGAGGTGATGACTTCACCTTTGGGTCCATGGCTGGGGTTCTGAGGAAAGCCTTGGCCCAAGCACTGGTCTCCTATTATGCTTTTGCAGGGGAAGTAGTGAGTAACTCAGTGGGTGAACCTGAACTTCTATGCAATAACCAAGGGGTGGATTTCACGGAGGCTTACGCAGATGCAAAACTTCATGACCTCAGCTTGTACAACCCTGACGATAGTATTGAAGGCAAGCTTGTCCCCAAGAAGCAGCATGGTGTCCTCTGTGTGCAGGTGACTGAGCTCAAATGTGGTGGAGTCGTGGTGGGCTGTACATTCGATCATCGGATAGCTGACGCATATTCTGCTAATATGTTCCTAGTTTCATGGGCTGAGATGGCCCTGTGCAAGCCACTATCTGTGGTTCCATCTTTCCGGCGCTCTCTTCTCAACATTAGACGTCCAGGCTCCTACGATCCCTCCCTGGATGAAATGTACGTCCTTATATCAGCCTTACCTCCTCCCAGAGCTCCGCAGCCGGGCGGTGCTGATCCTTTCATAAGCCGCATATACTATGTCACGGCCGAACAACTCAGTCTACTCCAAACACTAGCCAGTATCAGCAAGGGCAGCTCCTACAAGAGAACTAAACTAGAGTCTTTCAGTGCATTTTTGTGGAAGATGGTCGCGGCAAGTGCTGTCATGGAAAATGATAATAAAATGATATGCAAGATGGGCATCGTGGTGGACGGAAGAAGGCGGTTAAGCAGTGGAGACGAGGATAAATCAGCAGTGATGGCCTCTTACTTTGGAAATGTGCTGTCAATCCCCTTTGGTGAGAAGATGATAGATGAACTGAAAGAGAAACCCTTGAGTTGGGTGGCAGATGCCGTTCACGAGTACCTGGAAGGGGCAGTGACAAAGGAGCATTTCTTGGGCCTCATCGACTGGGTGGAGGCTCACCGTCCAGAGCCTGCTTTAGCAAGGATATACTGCAGTGGCAGCAGCGATGGACCGGCACTTGTGGTATCATCAGGGCAGAGATTCGCAGTGTCAAAGGTGGATTTCGGGTGGGGTAGGCCGGCTCTGGGATCATTCCATTTTCCATGGGGTGGTGAAGCTGGGTACGTGATGCCAATGCCAAGTCCGGCCAGAGATGGTGACTGGGTGGTGTACATGCACCTCTTGAAAGGGCAGATAGAGTTTATTGAGACTGAGGCCGCCCATGTCTTTAGACCTGTGACATCTGAATATCTCAACTTGATCAACTGA 1413 0.5039 MGGGGKYFTVTVTRKELVAAEVPMQEHWLPLSNLDLLLPPIDVSMFFCYKKPHQNANGGDDFTFGSMAGVLRKALAQALVSYYAFAGEVVSNSVGEPELLCNNQGVDFTEAYADAKLHDLSLYNPDDSIEGKLVPKKQHGVLCVQVTELKCGGVVVGCTFDHRIADAYSANMFLVSWAEMALCKPLSVVPSFRRSLLNIRRPGSYDPSLDEMYVLISALPPPRAPQPGGADPFISRIYYVTAEQLSLLQTLASISKGSSYKRTKLESFSAFLWKMVAASAVMENDNKMICKMGIVVDGRRRLSSGDEDKSAVMASYFGNVLSIPFGEKMIDELKEKPLSWVADAVHEYLEGAVTKEHFLGLIDWVEAHRPEPALARIYCSGSSDGPALVVSSGQRFAVSKVDFGWGRPALGSFHFPWGGEAGYVMPMPSPARDGDWVVYMHLLKGQIEFIETEAAHVFRPVTSEYLNLIN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1390 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 429 - -
Vvi9g1390 470 Gene3D - 221 452 IPR023213 -
Vvi9g1390 470 Gene3D - 7 210 IPR023213 -
Vvi9g1390 470 Pfam Transferase family 9 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1390 Vvi-Chr9 22734039 22735548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1390 19 451 Monolignol Biosynthesis Gene Families AT5G48930 27.376 1.51e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1390 - - vvi:100263348 948.732