Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1381 ATGTATAACAGCTTGAACTCTCCTTCACAGCTGACTGGTTGGAAGTCGAGTGGAGGTGATCCTTGTGGGGAATCCTGGAAAGGAATCAAATGCTCGGGCTCATCTATAACTGAAATGTAG 120 0.4583 MYNSLNSPSQLTGWKSSGGDPCGESWKGIKCSGSSITEM* 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1381 39 Pfam Leucine rich repeat N-terminal domain 2 32 IPR013210 -
Vvi9g1381 39 MobiDBLite consensus disorder prediction 1 39 - -
Vvi9g1381 39 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1381 Vvi-Chr9 22594352 22594471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1381 1 39 Strubbelig Receptor Gene Family AT1G78980 66.667 9.60e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1381 - - vvi:100254729 86.6557