Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1322 ATGTTCTCCAAACTCCTCCCAATTCCCAGAAATTTCACAACACCATCTCCCAGTCCCACTTTCCCTCCTCTCCCAAATCTCCCATTTCACCTCAAACCTTTTCCCCACAAATTCCCTTCAATTACTCAGCTCTCTTTCCCCCACTATCCCCATCTCCCACAAGCATCACCATCCTGGAATCAACAACAGGAGGATGAAGATGAAGATGAAGATGAAGAAGAAGGCCAAGCTCGAGCTGCGGTTTCGGAAATTCTCAGAGAATCCGGGGTTTCGGAAGAGGAATCGGTGGAAATCGCACTGAATTCGCCCAAATATGTGAAAATGTTGGTGGATGGTGTTCGGGATTTGGAGGAGTGGAATGCGTGGAAAAAGGGAGCCGAAGAAGCTGAGTCTTTCAAGGAAAAGGTGTATCGTTTGGCTAGAGAGAAAGGCGATTATGGGAGACTTGCTTTCTTGGAGAGCATTGGTTTGAGTCTCTCGTCGGCACTGAGCGTGGCGCGATACCTATCCTCCGAATCGCTTCCGGGTCTCATTGAAAAGGTCCGGTTTGTGAAGCAAATGTTCTTTTCTGAAGGTAACGATGAAGGGTTTCTAGGCAAAAATGCCCGCCGCATGATGATGTACCTATCGATTCCTATTGATGAGGACTTGCAACAGACCTTGTCATTTTTTGAAAAGATTGAAGCAAGGCGTGGAGGGTTGGACATATTGTGTTCCAAAGATGCCTCTTTTGGGTATCTTGTTGAATCATTTCCGCGTCTTCTTTTGCTTTCAGTGGAATCCCACTTGAAACCTATGATGAAATTTCTTGAAGATATTGGAGTCCAAAGAGGAAGCATGAGAAATGTACTTCTATTGTATCCACCCATCATCTTTTACGACATTGAGAAGGACATCAAACCAAGACTTCTAGCATTCGAGAAGATTGGTGCAGCAGATAAAGATCTCGGTAGGATGTTGGTCAAATATCCATGGATTATTTCTACAAGTATTCAAGAAAACTATGAGGAGATCCTTTCTTTCTTTTATAGAGAGAAGGTACCAAAATCTAGTGTTGATAGTGGAATCAAAAGTTGGCCACATCTACTGGGTTGCTCAACTAGCAAGCTGAAATTGATTGTGGAACAGTTTGGTGAATTAGATGTTAGAAACAAGAAGTTGGGTCAAATTATTGCTACAAGTCCTCAGCTACTGCTGCAGAAACCCAATGAATTTCTTGAGGTTGTTTCATTTCTTGAAGAACTGGGATTTGATCGGGAAACAGTGGGGAGGATACTCGGCCGCTGTCCTGAAATATTTGCTGCCAACATTGAGAAAACCCTAAAGAAGAAGCTTGAATTCCTTGCTAGTATTGGCATCTTCAAAGACCATCTTCCTCGGGTTATCAGAAAATACCCAGAGCTTTTTGTTTCAGACATCAACAGAACCTTACTTCCTCGGACTAAGTATTTAAGGAAAACAGGGTTTTCAAAGAGGGATATCGCATTCATGATCCGTAGATTCTCTCCTTTACTAGGGTACAGCGTGGAGGAGGTATTGAGACCAAAGCTAGAATTCCTAGTGAAGACAATGGAGAAGCCAGTTAAGGAAGTTGTAGATTATCCAAGGTATTTCAGCTACTCACTGGAGAAGAAGATAAAACCCAGGTTCTGGGTGCTAAAGGTAAGGAATGTTGATTGTAGTCTAAAAGACATGTTGGCCAAGAATGATGAGGAGTTTGCTGCAGAGTTTATGGATGTTGGAAGAACGCCTGTTCCCTCCCCTCACACCTCTCCTCCCACCTCTCCTCCCATTTCTCCTCATTGA 1806 0.4347 MFSKLLPIPRNFTTPSPSPTFPPLPNLPFHLKPFPHKFPSITQLSFPHYPHLPQASPSWNQQQEDEDEDEDEEEGQARAAVSEILRESGVSEEESVEIALNSPKYVKMLVDGVRDLEEWNAWKKGAEEAESFKEKVYRLAREKGDYGRLAFLESIGLSLSSALSVARYLSSESLPGLIEKVRFVKQMFFSEGNDEGFLGKNARRMMMYLSIPIDEDLQQTLSFFEKIEARRGGLDILCSKDASFGYLVESFPRLLLLSVESHLKPMMKFLEDIGVQRGSMRNVLLLYPPIIFYDIEKDIKPRLLAFEKIGAADKDLGRMLVKYPWIISTSIQENYEEILSFFYREKVPKSSVDSGIKSWPHLLGCSTSKLKLIVEQFGELDVRNKKLGQIIATSPQLLLQKPNEFLEVVSFLEELGFDRETVGRILGRCPEIFAANIEKTLKKKLEFLASIGIFKDHLPRVIRKYPELFVSDINRTLLPRTKYLRKTGFSKRDIAFMIRRFSPLLGYSVEEVLRPKLEFLVKTMEKPVKEVVDYPRYFSYSLEKKIKPRFWVLKVRNVDCSLKDMLAKNDEEFAAEFMDVGRTPVPSPHTSPPTSPPISPH* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1322 601 SMART mt_12 423 454 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 495 527 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 353 383 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 528 559 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 459 490 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 388 418 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 MobiDBLite consensus disorder prediction 1 21 - -
Vvi9g1322 601 MobiDBLite consensus disorder prediction 586 601 - -
Vvi9g1322 601 PANTHER CGI-12 PROTEIN-RELATED 152 376 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 Gene3D Transcription termination factor 3, mitochondrial 369 581 IPR038538 -
Vvi9g1322 601 FunFam Mitochondrial transcription termination factor family protein 368 581 - -
Vvi9g1322 601 Pfam mTERF 267 574 IPR003690 GO:0003690|GO:0006355
Vvi9g1322 601 MobiDBLite consensus disorder prediction 62 76 - -
Vvi9g1322 601 MobiDBLite consensus disorder prediction 51 79 - -
Vvi9g1322 601 MobiDBLite consensus disorder prediction 581 601 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi9g1322 mTERF 1.4e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1322 K15032 - vvi:100244378 1077.39