Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1292 ATGGCAACCTCCCTGAAGATCAATCAAATTGTGAGGCTGAAACAGGTGATGAAGAAGTGGAAGGCAATGAGCATGAAGCTCAGACATGGACCCTCTCCAGATGCCACTGACACTGATACTGACAGTGAGATCGACACCGATAGGGGGGCTTCTGCGCCTCGCACTCCCTCTGGCTTCCTTGCCGTCTACGTTGCATCCGAGAGGGAGAGGTTCTTGGTCCCCACTAGGTATGTGAATCTTCCAGTGTTTGTGACCCTTTTGAAGAGAGCTGAGGAGGAGCATGGATTCAAGTTCAGTGGAGGGATAGTGGTGCCTTGTGAAGTAGGGTTCTTCAGGAAAGTGCTGGAGTTCCTTGAGAAAGATGAGAAGAAGTTTGGGAGCTTGGAGCTGGATGAGTTCTTGAAGATGTTTTCCGAAGTGGGTTTTGATTCTTCATGTAAGACAAGTAGCTACGCCTACAACATTAATACTTGTCATGACCAGTTCACACATCTGATGCACAAGGCCAGCTAG 513 0.4873 MATSLKINQIVRLKQVMKKWKAMSMKLRHGPSPDATDTDTDSEIDTDRGASAPRTPSGFLAVYVASERERFLVPTRYVNLPVFVTLLKRAEEEHGFKFSGGIVVPCEVGFFRKVLEFLEKDEKKFGSLELDEFLKMFSEVGFDSSCKTSSYAYNINTCHDQFTHLMHKAS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1292 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 114 IPR003676 GO:0009733
Vvi9g1292 170 MobiDBLite consensus disorder prediction 32 48 - -
Vvi9g1292 170 Pfam Auxin responsive protein 12 118 IPR003676 GO:0009733
Vvi9g1292 170 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1292 Vvi-Chr9 21565341 21565853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1292 7 129 Calmodulin-binding Proteins AT3G43120 34.507 8.80e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1292 K14488 - vvi:100253008 328.561