Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1289 ATGGATGACGATGTGGAGAGTGGTGCTTTGGGGCCTTACCAAGATAAGCCAAGGATTTTCCCCAACATGCGGAGTAAATCTTACACCCCATTGATTTTTCGAATTTTCATGGGAATAAATGTCCGTGTGCTTTTTGTACTTCTGCTCTTGGGCTTGGGAGCTGTTTTTTATGTTGGGGCAAGAACTTCTCCAATCCTTGTGTTTGTCTTCTCAGTGTGCATCATCAGCTTCCTTTTATCAGTCTATCTTACTAAATGGGTACTAGCGAAGGACGAGGGGCCTCCTGAGATGGCTCAGATATCAGATGCGATACGTGATGGAGCAGAAGGTTTCTTCAGGACCCAATATGGGACTATTTCCAAGATGGCAATGTTACTAGCTCTTGTGATCCTTAGCATATATTTGTTTCGCAGTACAACTCCTCAACAAGAATCTTCTGGCATAGGAAGGTCAACAACTGCATATATTACTGTTGCTGCCTTTCTCCTAGGGGCTCTTTGTTCAGGAATTGCTGGGTATGTTGGAATGTGGGTGTCGGTACGTGCAAACGTTCGAGTCTCAAGTGCTGCAAGACGGTCTGCAAGAGAAGCATTGCAGATAGCTGTTCGTGCTGGTGGTTTCTCTGCCCTTGTTGTTGTTGGTATGGCTGTAATTGGTGTTGCCATCCTTTATGCCACATTTTATGTTTGGTTGGGCGTAGATTCGACAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTTGTGGGATATGGATTTGGAGCTTCATTTGTTGCCCTTTTTGCTCAGTTGGGTGGTGGAATATATACAAAAGCAGCAGATGTTGGAGCTGATCTGGTTGGAAAGGTGGAGCAGGGAATACCTGAAGATGATCCTCGAAATCCTGCTGTCATTGCAGATTTGGTTGGAGACAATGTTGGTGATTGTGCTGCTAGAGGTGCTGATCTGTTTGAAAGTATTGCAGCTGAAATCATCAGTGCTATGATACTGGGTGGAACAATGGCTCAACGTTGCAAGATTGAAGATCCATCTGGTTTCATCCTGTTTCCTCTTGTCATTCACTCTTTTGACCTGGTAATATCATCGGTTGGAATATTTTCAATAAGGGGGACACGTGACTCTGGAGTGAAGTCACCTGTCGAGGATCCAATGGCAATTCTTCAGAAAGGATACTCCATTACAATAATTTTAGCTGTTTTGACATTTGGCTTGTCTACCCGTTGGCTACTTTACACCGAACAAGCACCTTCTGCTTGGATGAACTTTGCCTTATGTGGATTAGTTGGAATTATGACAGCTTATGTTTTTGTCTGGATCACCAAGTACTATACTGACTACAAGCATGAACCTGTTCGCACTCTAGCTCTTTCTAGCTCCACAGGGCATGGGACCAACATAATAGCAGGTGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCATCGTCATTAGCATATCTATTGTCTCAGCTTTCTGGCTCGGCCAAACTTCGGGCCTAGTGGATGAAACTGGGAACCCAACTGGTGGGCTGTTTGGGACTGCTGTTGCAACAATGGGAATGCTGAGCACTGCTGCCTATGTTCTAACTATGGATATGTTTGGTCCAATAGCTGATAATGCTGGTGGAATAGTAGAGATGAGTCAGCAGCCTGAAAGTGTTCGGGAGATCACTGATCTTCTTGATGCAGTTGGGAACACCACAAAAGCTACCACCAAGGGATTCGCCATTGGATCCGCGGCACTCGCATCCTTCCTTCTGTTCAGTGCTTATATGGATGAGGTGTCAGCATTTGCTCATGAACCTTTTAAGCAGGTTGATATTGCCATTCCAGAAGTTTTTGTTGGTGGGTTGTTGGGCTCTATGCTTATTTTCCTATTTAGTGCATGGGCATGTTCTGCAGTTGGCCGGACTGCTCAAGAGGTTGTCAATGAAGTAAGAAGACAGTTTATTGAGAGGCCAGGTATCATGGACTATAAAGAGAAACCAGACTATGGTCGTTGTGTTGCCATTGTAGCATCTGCATCTCTGAGGGAGATGATAAAACCCGGTGCTTTGGCTATTGTATCACCTATAGTGGTTGGCTTTCTGTTCCGGATTTTGGGATACTACACCGGACATCCTCTACTCGGGGCTAAAGTTGTGGCTTCAATGTTGATGTTTGCAACAGTTGCGGGTATACTTATGGCCCTTTTCCTGAACACAGCTGGTGGTGCCTGGGACAATGCAAAGAAGTATATAGAGACGGGCGCGCTTGGAGGCAAGGGAAGTGATGCCCACAAAGCTGCAGTTACCGGAGACACTGTGGGAGACCCCTTCAAAGACACGGCTGGACCGTCGCTCCATGTTCTAATCAAAATGTTGGCAACCATCACTCTGGTCATGGCACCGGTCTTTCTGTGA 2403 0.4565 MDDDVESGALGPYQDKPRIFPNMRSKSYTPLIFRIFMGINVRVLFVLLLLGLGAVFYVGARTSPILVFVFSVCIISFLLSVYLTKWVLAKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMAMLLALVILSIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSALVVVGMAVIGVAILYATFYVWLGVDSTGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVIHSFDLVISSVGIFSIRGTRDSGVKSPVEDPMAILQKGYSITIILAVLTFGLSTRWLLYTEQAPSAWMNFALCGLVGIMTAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVIVISISIVSAFWLGQTSGLVDETGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIVSPIVVGFLFRILGYYTGHPLLGAKVVASMLMFATVAGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1289 800 Pfam Inorganic H+ pyrophosphatase 75 795 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi9g1289 800 PIRSF H+-PPtase 60 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi9g1289 800 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 90 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi9g1289 800 NCBIfam V-type H(+)-translocating pyrophosphatase 68 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi9g1289 800 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 63 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1289 Vvi-Chr9 21520460 21535313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1289 1 800 Primary Pumps ATPases AT1G16780 88.750 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1289 K23025 - vvi:100247980 1480.69