Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1285 ATGGATTCAAAGAAGTCTAATAAGATCAGTGAGATTGTTAGGCTTCAGCAGATCCTCAAGAAGTGGAAAAAGCTTGCAAATGCACCAAGAAACAGCAACAAAAATGGCAGCCACAGCTCTACTTCCTCCTCCTCCAACAATGGCAGCAAGAGCATCAAGTTCCTCAAGAAGACTCTCTCCTTCACAGACACTAGTTCAATGCTTTCTACCGAGGTCGTCCCAAAAGGGTTTCTGGCCGTGTGCGTGGGGAAGGAGCTGAAGAGGTTCATCATCCCGACAGAGTATCTGGGTCACCAGGCATTTGGGGTTCTGCTGAGGGAAGCCGAAGAAGAATTCGGGTTTCAGCAGGAGGGTGTGCTCAAGATCCCATGTGAAGTGGCTGTGTTTGAGAAGATCTTAGAGGTGGTGGAAGAGAAGAGAGATCATGTGTTTTTCCTAAATGCAGAGAAGGAGATGATTGGTTGTTGCTCATCCTCAGATTGTGAGCTCACACCCTCTCATCATCCTCAAATGTGTAGATGA 522 0.4713 MDSKKSNKISEIVRLQQILKKWKKLANAPRNSNKNGSHSSTSSSSNNGSKSIKFLKKTLSFTDTSSMLSTEVVPKGFLAVCVGKELKRFIIPTEYLGHQAFGVLLREAEEEFGFQQEGVLKIPCEVAVFEKILEVVEEKRDHVFFLNAEKEMIGCCSSSDCELTPSHHPQMCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1285 173 MobiDBLite consensus disorder prediction 26 49 - -
Vvi9g1285 173 Pfam Auxin responsive protein 20 135 IPR003676 GO:0009733
Vvi9g1285 173 MobiDBLite consensus disorder prediction 28 49 - -
Vvi9g1285 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 47 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1285 Vvi-Chr9 21457323 21457844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1285 1 173 Calmodulin-binding Proteins AT2G24400 55.080 3.32e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1285 K14488 - vvi:100265117 313.923