Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1240 ATGGACATTGGCAAGAAGCAAGAGGTTGAGGCGAAAAAGAAGAAGAATGCTGAGAATCGGAAACTGATTTACAGTAGAGCTAAGCAGTATGCAAAGGAGTATGATGAGCAGCAAAAGGAGCTGATTCAATTGAAGCATGAGGCTAAGCTGAAGGGTGGATTTTACGTTGATCCAGAGGTTAAACTTCTATTTATTATTCGTATCCGTGGTATCAATGCTATGCACTCGAAGATGACAAAGATTTTGCAGCTCTTGCGTTTGAGACAGATATTCAATGGGGTGTTTCTTAAAGTGAACAAAGCAACAATGAACATGTTGCACAGGGATGAGCCTTGTGTGACTTATGGGTACCCCAATTTGAAGAGTGTGCGAGAACTGATTTACAAGAGGGGCTATGGAAAGTTGAACAAGCAGAGAACTGCCTTGACCGACAACTCCATTGTGGAATAG 450 0.42 MDIGKKQEVEAKKKKNAENRKLIYSRAKQYAKEYDEQQKELIQLKHEAKLKGGFYVDPEVKLLFIIRIRGINAMHSKMTKILQLLRLRQIFNGVFLKVNKATMNMLHRDEPCVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVE* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1240 149 FunFam 60S ribosomal protein L7 62 149 - -
Vvi9g1240 149 Coils Coil 27 47 - -
Vvi9g1240 149 CDD Ribosomal_L7_archeal_euk 62 149 IPR035808 -
Vvi9g1240 149 Pfam Ribosomal L30 N-terminal domain 5 58 IPR012988 -
Vvi9g1240 149 Gene3D - 62 147 IPR036919 -
Vvi9g1240 149 PANTHER 60S RIBOSOMAL PROTEIN L7 3 149 IPR039699 -
Vvi9g1240 149 Pfam Ribosomal protein L30p/L7e 63 126 IPR016082 -
Vvi9g1240 149 SUPERFAMILY Ribosomal protein L30p/L7e 62 149 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1240 Vvi-Chr9 20457154 20458798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1240 5 149 Cytoplasmic Ribosomal Protein Gene Family AT2G01250 83.448 1.52e-83 241