Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1232 ATGATTTTTGGTATGGTTGGTGAAGAGAAAATGAAAAAAGAAAGAGATCGTGCTTTGGGGAAGTTTGGTATTATTTGCATGGAAGATCTTATTCATGAGATCATGACTGTTGGACCTCATTTTAAGGAGGCCAACAACTTCCTATGGCCATTTAAACTGAAGGCACCATTGGGTGGTTTGAAGAAGAAGAGGAATCACTATGTTGAAGGAGGAGATGCTGGAAACCGTGAAAATTACATCAATGAGCTCATTAGAAGAATGAACTAG 267 0.3858 MIFGMVGEEKMKKERDRALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1232 88 Gene3D - 23 88 IPR036919 -
Vvi9g1232 88 SUPERFAMILY Ribosomal protein L30p/L7e 18 88 IPR036919 -
Vvi9g1232 88 PANTHER 60S RIBOSOMAL PROTEIN L7 17 88 IPR039699 -
Vvi9g1232 88 FunFam Uncharacterized protein 15 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1232 Vvi-Chr9 20346043 20360381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1232 16 88 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 91.781 3.80e-47 149