Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1223 ATGTTTAGTATTAGATTGACACGATTAAAACTTTGTTTCAATTTAGATGGTGTTTATTTTTTCTACTTAAATTTAAATGAAGGTGGGAGCAGGAAGGAAGTGTGGGTAAAGATTTTAGGACTTCCAGTTTCGTTATGGGATCCGTCCATTTTGCGGAAAGCTTTGGGGAAGTTTGGTATTATTTGCATGGAAGATCTTATTCATGAGATCATGACTGTTGGACCTCATTTTAAGGAGGCCAACAACTTCCTATGGCCATTTAAACTGAAGGCACCATTGGGTGGTTTGAAGAAGAAGAGGAATCACTATGTTGAAGGAGGAGATGCTGGAAACCGTGAAAATTACATCAATGAGCTCATTAGAAGAATGAACTAG 375 0.376 MFSIRLTRLKLCFNLDGVYFFYLNLNEGGSRKEVWVKILGLPVSLWDPSILRKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1223 124 Gene3D - 51 124 IPR036919 -
Vvi9g1223 124 FunFam Uncharacterized protein 51 124 - -
Vvi9g1223 124 PANTHER 60S RIBOSOMAL PROTEIN L7 40 124 IPR039699 -
Vvi9g1223 124 SUPERFAMILY Ribosomal protein L30p/L7e 53 124 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1223 Vvi-Chr9 20239567 20252407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1223 43 124 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 85.366 1.14e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1223 K02937 - cit:102614577 152.525