Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1204 ATGGCTGAGGTAGACAGCTTTCAGAATCTGCTAGCTGCAAGGATGTTACTGAAAACTAGCCTAGAGAAATCAAGAAGTGTAGCTTCTGCCCTGGAGAAAACTGGCCCCAGGTTGGAGGAGATTAAGCAAAGTCTGCCATCATTGGAAGCTGCTCTTCGGGCACAGAAATGCAGTCTTGCTGCACTTGGGGGCCATATCAGCCGCGCAGTTGGCCCTGCTGCTGCAGTTCTGAAGGTGTTTGATGCCATCCATGGCCTAGAAAAGTCACTTTCATCTGACCCGAGTTCGGACCTCTATGGCTACCTCGTAGTCGTTAAAAGGCTCGAGGAGGCCTTGAGGTTTCTGGCTGAGAATTGTGGATTGGCAATAAGATGGTTGGAGGATGTGGTCGAGTTCTTGAAAGAAAATGCAGTCACCGATGATCACCGGTACCTCTCCAATGTGACTAAATCTTTGAAGATCCTCAGGGAGTTGCAGGCAAATGAGGAATGCGCCCGTCTCGATGGAGGGCTTCTCAGTGCTGCATACGACAAGCTGGAAACCGAATACAGACGGCTTTTGAGAGAAAATGGTGTTCCTCTCCCCATCATTTCCTCAGCATCCTCCATTGTTGCTCCATCATCTTTACCAGTTTTTGTTATTCAGAAGTTGCAGGTCATTATTGAGAGGTTAAGTGCTAATAATAGACTTGAAAACTGTCTTTCTACTTACATAGACATTCGTAGTTCAAATGCCAGAGCATGTTTAGAAGCTCTTGGTTTGGACTACCTCGAGATATCTATCTTTGAGTTCGATAATTTGCAGTACATGGAGAGTTCCCTAGATATGTGGAGCAAGCATTTAGAATATTCTGTGAAGAATCTGCTGGAGCTCGAGTATCAGCTGTGCAACGACGTATTCGAGAAGGTTGGATTGGATGTTTCAATGGATTGCTTTGCAAAGATTGCTATCCAGTCCGGATTTCTGGCTTTCATCCAATTTGGGAACACTGTCACAGAGAGTAAGAAAGATGCAGTCAAGCTCTTTAAACTATTGAAAATCTTCCATACTTTGAATGAACTGAGATTGGATTTCAACCGCCTATTTGGGGGAAAATCTTGCAATGAAATTCAAATCCCAACGAGGCATCTCATCAAGAGGGTGATTGATGGTGCTTGTGAGATATTTTGGGAGCTTTTGCCGCAGGTGGAGGTTCATAGGGGGACTTCTCCTCCTTCCAATGGCAGTGTTCCGAGTCTGGTGAGCTTCGTCATTGACTACTGTAACCAGCTGCTCGAGGATGATTACAGGCTAACCATGATACAGGTTCTGGAGATTCACCAGAACTGGAAACACCAAAAATTTCAAGAGGAACTCTTGAGGAAGGAGGTCTGCAACATTGTGGAGGCTATTCGGCTGAACCTGGATGCCTGGTCCAAGTCCTATGAGGACACTCCACTGTCCTACATTTTCTTGATGAACAATCACTGTCACTTGTACAAGGCCCTCAAGGGGACAAGCCTTGGGGACCTCATAGGTGACTTTCAGTTGAGAGAACACAAAAAGTATAGGGACTATTACGCATCGATCTACTTGAGGGATAGTTGGGGAATGCTTCCAGGCCTTTTAGGCCATGAAGATGAGACCTTATTCTCAGATGGAAGGGCCATGGCCTGCAGTCTGGTGAAGAAGAAGCTGAAGACATTCAATGAGGCCTTGGATGGAACCTATAAGAAGCAATCGAACTGGGTCCTGGCCAACAAAAACCTCAGGAAGAGGATATGCCAGCTTGTGGTTGATGCCATTGTGCCTGTATATAGGAGCTACATTCAGAAATATGGGCATTTTATTGAACAAGACGGCATTAAGAATGTGAAAATTTACACTGAAGAGGGTTTGGTGAATATGCTGAGCTCAATGTTTCAGCCAAAGATGGGGAAGTGTTATAGCACTAATACCAGGCACTCCATTGATAAAAAGAGTGAGATTGTCACCAGTCAGTTTCCCTCTACTACTGTTGTAGCATGA 2007 0.4529 MAEVDSFQNLLAARMLLKTSLEKSRSVASALEKTGPRLEEIKQSLPSLEAALRAQKCSLAALGGHISRAVGPAAAVLKVFDAIHGLEKSLSSDPSSDLYGYLVVVKRLEEALRFLAENCGLAIRWLEDVVEFLKENAVTDDHRYLSNVTKSLKILRELQANEECARLDGGLLSAAYDKLETEYRRLLRENGVPLPIISSASSIVAPSSLPVFVIQKLQVIIERLSANNRLENCLSTYIDIRSSNARACLEALGLDYLEISIFEFDNLQYMESSLDMWSKHLEYSVKNLLELEYQLCNDVFEKVGLDVSMDCFAKIAIQSGFLAFIQFGNTVTESKKDAVKLFKLLKIFHTLNELRLDFNRLFGGKSCNEIQIPTRHLIKRVIDGACEIFWELLPQVEVHRGTSPPSNGSVPSLVSFVIDYCNQLLEDDYRLTMIQVLEIHQNWKHQKFQEELLRKEVCNIVEAIRLNLDAWSKSYEDTPLSYIFLMNNHCHLYKALKGTSLGDLIGDFQLREHKKYRDYYASIYLRDSWGMLPGLLGHEDETLFSDGRAMACSLVKKKLKTFNEALDGTYKKQSNWVLANKNLRKRICQLVVDAIVPVYRSYIQKYGHFIEQDGIKNVKIYTEEGLVNMLSSMFQPKMGKCYSTNTRHSIDKKSEIVTSQFPSTTVVA* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1204 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 634 IPR004140 GO:0000145|GO:0006887
Vvi9g1204 668 Pfam Exo70 exocyst complex subunit 277 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi9g1204 668 Gene3D Exocyst complex component Exo70 124 640 - -
Vvi9g1204 668 SUPERFAMILY Cullin repeat-like 76 634 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1204 Vvi-Chr9 19674807 19676813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1204 6 637 EXO70 exocyst subunit family AT4G31540 57.716 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1204 K07195 - vvi:100241555 1314.67