Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1202 ATGGCTGAGGTAGACAGCTTTCAGAATCTGCTAGCTGCAAGGATGTTTTTGAAAACAAGCCTAGAGAAATCAAGAACTGTAGCTTCTGGCCTGGAGAAAACCGGCCCCAGGTTGGAGGAGATTAAGCAAAGACTGTCATCATTGGAAGCTGCGGTTCGGCCTCTTCGGGCACAGAAATGTAGTCTTGCTGCAGTTGGGGGCCATATCAGCCGCGCAGTTGGCCCTGCTGCTGCAGTTCTGAAGGTGTTTGATGCCATCCATGGGCTGGAGAAGTCGCTTTCGTCTGACCCGACTTCAGACCTCTATGGGTACCTCTTAGTCGTTAAAAGGCTGGAGGAGGCCTTGAGGTTTCTGGCTGAGAATTGTGGATTGGCAATAAGGTGGTTGGAGGATGTGGTTGAGTTCTTGAAAGATAATGGCGTCACGGATGATCACCGGTACCTCTCCAATGTGACTAAATCTTTGAACATCCTCAGGGAGTTGCAGGCAAGCGAAGAACGTGCCCGTCTCGATGGAGGGCTTCTCAGTGCTGCATACGACAAGCTGGAAACCGAATACAGACGGCTTTTGGGAGAAAATGGTGTTCCTCTTCCCATCATTTCCTCGTCATCTTCCATTGTTGCTCCATCATCTTTACCGGTTTTTGTTATTCAGAAGTTGCAGGCCACTATTGAGAGGTTGCGTGCCAATAATAGACTTGAAAACTGCATTTCTACTTATATTGATATTCGTAGTTCAAATGTTACAGCATGCTTAGAAGCTCTTGGTTTGGACTACCTCGAGATATCTATCTTCGAGTTCGATAACTTTCTGAACATGGAGAGTTCCGTAGATCTGTGGAGCAAGCATTTAGAGTATGCTGTGAAGAATCTGCTGGAGCTCGAGTACCAGCTCTGCAACGACGTTTTTGAGAAGATCGGGTCGGATGTTTCAATGGATTGCTTTGCAAGGATTGCTATCCAGTCCGGATTTCTGGCTTTCATTCAGTTTGGGAACACTGTCACAGAGAGTAAGAAAGATGCAGTCAAGCTCTTTAAACTATTGAAAATCTTCCATACTTTGAATGAACTGAGATTGGATTTCAACCGCCTGTTCGGGGGAAAATCTTGCATTGAAATTCGAATCCCAACCAGGCATCTCATCAAGAGGGTGATCGATGGTGCTTGTGAGATATTTTGGGAGCTTTTGCCGCAGGTGGAGGCTCATAAGGGGACTTCTCCTCCTTCCAATGGCAGTGTTCCAAGTCTGGTGAGCTTCGTCGTTGACTACTGTAACCAGCTGCTCCAGGATGATTACAGGCCAACCATGATACAGGTTCTGGAGATTCACCAGAACTGGAAACACCAAAAATTTCAAGAAGAACTCTTGAGGAAGGAGGTCCGCAACATTGTGGAGGCGGTTCAGCGGAACCTGGATGCCTGGTCCAAGGCCTATGAGGACACCTCACTGTCCTACATTTTCTTGATGAACAATCACTGTCACTTGTACAAGGCCCTCAAGGGGACAAGCCTTGGGAACCTCATAGGTGACTCTCAGTTGAAAGAACACAAAAAGAACAAGGACTATTACGCGTCGATCTACTTGAGGGAGAGTTGGGGAATGCTTCCAGGCCTTTTAGGCCATGAGGATGAGACCTTGTTCTCAGGTGGAAGGGCCATGGCCTGCAGTCTGGTGAAGAAGAAGCTGAAGGCATTCAATGAGGCCTTGGATGGAACCTATAAGAAGCAATCGAACTGGGACGTGGCCGACGAAAACCTCAGGAAGAGGATATGCCAGCTTGTGGTTGATGCCATTGTGCCTGTATATAGGAGCTACATTCAGAAATATGGGCATTTTATTGAACAAGATGGCATTAAGAATGTGAAAATTTACTCTGAAGAGGGTTTGGTGAGTATGCTGAGCTCAATGTTTCAGCCAAAGAAGGGGAAGTGTTATAGCATTAATACCAGGCACTCCATTGATAAAATGAGTGAGATTGTCACCAGTCGGTTTCCCTCTACTACTGTTGTAGCATGA 2016 0.4673 MAEVDSFQNLLAARMFLKTSLEKSRTVASGLEKTGPRLEEIKQRLSSLEAAVRPLRAQKCSLAAVGGHISRAVGPAAAVLKVFDAIHGLEKSLSSDPTSDLYGYLLVVKRLEEALRFLAENCGLAIRWLEDVVEFLKDNGVTDDHRYLSNVTKSLNILRELQASEERARLDGGLLSAAYDKLETEYRRLLGENGVPLPIISSSSSIVAPSSLPVFVIQKLQATIERLRANNRLENCISTYIDIRSSNVTACLEALGLDYLEISIFEFDNFLNMESSVDLWSKHLEYAVKNLLELEYQLCNDVFEKIGSDVSMDCFARIAIQSGFLAFIQFGNTVTESKKDAVKLFKLLKIFHTLNELRLDFNRLFGGKSCIEIRIPTRHLIKRVIDGACEIFWELLPQVEAHKGTSPPSNGSVPSLVSFVVDYCNQLLQDDYRPTMIQVLEIHQNWKHQKFQEELLRKEVRNIVEAVQRNLDAWSKAYEDTSLSYIFLMNNHCHLYKALKGTSLGNLIGDSQLKEHKKNKDYYASIYLRESWGMLPGLLGHEDETLFSGGRAMACSLVKKKLKAFNEALDGTYKKQSNWDVADENLRKRICQLVVDAIVPVYRSYIQKYGHFIEQDGIKNVKIYSEEGLVSMLSSMFQPKKGKCYSINTRHSIDKMSEIVTSRFPSTTVVA* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1202 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 637 IPR004140 GO:0000145|GO:0006887
Vvi9g1202 671 SUPERFAMILY Cullin repeat-like 79 637 IPR016159 -
Vvi9g1202 671 Gene3D Exocyst complex component Exo70 128 644 - -
Vvi9g1202 671 Coils Coil 38 58 - -
Vvi9g1202 671 Pfam Exo70 exocyst complex subunit 280 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1202 Vvi-Chr9 19633644 19635659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1202 6 670 EXO70 exocyst subunit family AT4G31540 56.932 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1202 K07195 - vvi:100262054 1316.21