Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1191 ATGCTGATTTCGACCAGGTATCTTCCGTTCTACTCCCCTCCCAACATGGGAGTTGTTACTGTTGTTCTGTCGTTTTTGTTGTTGTGGAATTGTATGTGTTTGTTTCCTGTGTGTGGTTTGAGCTCTGATGGGAAATCTCTAATGGCTCTCAAGAGCAAATGGGCAGTGCCCACTTTCATGGAAGAGAGCTGGAACGCCTCTCATTCCACCCCATGTTCATGGGTTGGAGTTTCATGTGATGAAACCCACATTGTGGTTTCTCTTAACGTCTCCGGTTTGGGAATATCCGGCCATTTGGGTCCGGAGATTGCAGATTTGAGGCACTTGACCAGTGTCGATTTCAGCTACAACAGTTTCTCAGGTCCAATTCCGCCGGAGTTTGGAAATTGCAGTCTTCTGATGGATTTAGACCTGTCTGTGAATGGTTTTGTTGGTGAAATACCCCAAAACTTGAACAGTTTGGGGAAGTTAGAATATCTGAGCTTTTGTAATAATTCATTGACTGGTGCAGTCCCTGAATCCTTGTTTCGGATTCCGAATTTGGAAATGCTTTACCTGAATTCCAACAAACTCAGTGGTTCAATCCCTTTGAATGTTGGAAATGCTACTCAGATTATAGCCCTATGGTTGTATGATAATGCATTATCAGGCGACATTCCTTCTTCCATTGGAAATTGTAGTGAATTGGAGGAGCTTTACTTGAATCACAACCAATTTTTAGGGGTTTTGCCTGAAAGTATAAACAATCTTGAGAACCTAGTTTATTTAGATGTGAGCAATAACAATTTAGAGGGTAAAATTCCTTTGGGTTCAGGCTATTGCAAGAAATTGGATACTTTGGTTCTGTCAATGAATGGTTTTGGTGGCGAAATTCCACCAGGTTTGGGCAACTGCACTAGCTTATCGCAGTTTGCTGCTTTGAACAATAGGTTATCAGGTAGTATTCCATCTTCCTTTGGACTGCTACATAAGCTCTTGCTTTTGTACCTCTCTGAAAATCATTTGTCGGGAAAGATACCACCTGAGATTGGGCAATGCAAGTCCTTGAGAAGCTTGCATTTATACATGAACCAACTTGAGGGGGAAATCCCAAGTGAATTAGGGATGTTGAATGAGTTACAAGACCTCCGTTTATTTAATAACCGGTTAACTGGTGAGATTCCTATTAGTATTTGGAAGATTCCAAGCCTCGAGAATGTTCTTGTGTACAATAACACTCTTTCTGGAGAACTGCCTGTAGAGATAACTGAGCTCAAGCACCTGAAGAACATTTCCTTGTTCAACAATCGGTTCTCTGGAGTCATACCTCAACGTTTGGGGATTAACAGTAGTTTGGTGCAGTTGGATGTTACAAATAATAAGTTCACTGGTGAAATCCCAAAAAGTATTTGCTTTGGAAAACAACTGAGCGTGCTGAATATGGGTCTGAATCTACTTCAAGGTAGTATTCCTTCTGCTGTAGGAAGCTGTTCAACTTTGAGAAGATTGATTCTTAGGAAGAATAATCTGACTGGGGTTCTTCCCAATTTTGCAAAAAATCCTAACCTTTTGTTGTTGGACCTCAGCGAGAATGGCATCAATGGAACAATTCCATTAAGCTTGGGGAACTGTACCAATGTCACCTCCATCAACTTGTCAATGAACAGGCTTTCAGGACTAATACCCCAAGAGCTAGGAAACCTTAATGTTCTTCAGGCTTTGAATCTTTCTCATAATGATTTAGGAGGTCCATTGCCATCTCAACTGTCAAATTGTAAGAATTTGTTTAAATTTGATGTGGGGTTTAATTCATTGAATGGTTCATTCCCATCAAGTTTAAGGAGCTTAGAAAATTTGTCAGTTTTGATTTTGAGGGAGAATCGTTTTACTGGGGGTATTCCATCTTTCTTGTCTGAACTACAATATCTTTCAGAGATACAGCTTGGTGGAAATTTTCTGGGAGGAAATATCCCTTCATCGATTGGAATGTTGCAGAATCTAATCTATTCATTGAATATCAGTCATAACAGATTGACAGGTTCACTTCCCTTAGAGCTTGGGAAGTTGATCATGCTAGAGCGATTAGATATATCTCACAACAATCTTTCAGGGACTCTATCAGCTCTTGATGGACTCCATTCGTTGGTCGTGGTTGATGTTTCATACAATCTTTTCAATGGTCCTCTCCCAGAAACTCTACTTTTGTTTTTGAATTCATCTCCTTCATCACTTCAGGGCAATCCTGACCTTTGTGTCAAATGTCCTCAAACTGGTGGCTTAACTTGCATCCAGAATAGGAATTTCAGACCATGTGAGCATTACTCAAGCAACCGGAGAGCCCTTGGAAAAATTGAAATTGCATGGATAGCTTTCGCATCATTGCTCTCATTTCTTGTGCTTGTTGGACTTGTTTGCATGTTTCTCTGGTACAAAAGAACAAAACAGGAAGACAAGATCACTGCTCAAGAGGGTTCATCTTCTCTACTCAACAAAGTAATAGAAGCTACTGAGAATCTCAAAGAATGCTATATCGTTGGAAAAGGAGCCCATGGAACTGTTTATAAGGCTTCGCTGGGTCCAAATAATCAGTATGCCTTAAAGAAACTTGTGTTTGCAGGGCTTAAAGGAGGAAGTATGGCTATGGTTACAGAAATTCAAACAGTTGGAAAGATCAGACACCGGAATTTGGTCAAGTTGGAAGATTTCTGGATAAGAAAGGAATATGGTTTTATCTTGTACAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTACATGAGAGGAATCCCCCACCAATTTTGAAGTGGGATGTTCGCTACAAGATAGCCATTGGAACAGCCCATGGATTAACATATCTGCACTATGACTGTGATCCTGCAATTGTGCATCGAGATGTCAAACCAGATAACATACTTCTAGACTCAGATATGGAGCCTCATATCTCTGATTTTGGTATTGCTAAGCTGCTGGATCAGTCCTCTTCTTTGTCACCATCCATCTCAGTTGTGGGTACAATTGGATATATTGCACCAGAGAATGCATTTACAACAACAAAGAGCAAAGAGTCTGATGTGTATAGCTTTGGGGTTGTCCTGCTTGAACTGATTACCAGAAAAAGGGCACTGGATCCTTCATTTATGGAGGAAACTGACATTGTGGGGTGGGTTCAGTCTATTTGGAGGAACTTGGAAGAAGTTGATAAGATTGTTGACCCAAGCCTTCTGGAGGAATTTATAGATCCAAATATCATGGATCAAGTGGTTTGTGTGCTTTTAGTAGCTTTAAGATGTACGCAAAAGGAGGCAAGCAAAAGGCCTACAATGAGAGATGTTGTTAATCAGTTAACAGATGCAAACGCTCCTGCCAGAGGCAAAAACAGCTAG 3363 0.4062 MLISTRYLPFYSPPNMGVVTVVLSFLLLWNCMCLFPVCGLSSDGKSLMALKSKWAVPTFMEESWNASHSTPCSWVGVSCDETHIVVSLNVSGLGISGHLGPEIADLRHLTSVDFSYNSFSGPIPPEFGNCSLLMDLDLSVNGFVGEIPQNLNSLGKLEYLSFCNNSLTGAVPESLFRIPNLEMLYLNSNKLSGSIPLNVGNATQIIALWLYDNALSGDIPSSIGNCSELEELYLNHNQFLGVLPESINNLENLVYLDVSNNNLEGKIPLGSGYCKKLDTLVLSMNGFGGEIPPGLGNCTSLSQFAALNNRLSGSIPSSFGLLHKLLLLYLSENHLSGKIPPEIGQCKSLRSLHLYMNQLEGEIPSELGMLNELQDLRLFNNRLTGEIPISIWKIPSLENVLVYNNTLSGELPVEITELKHLKNISLFNNRFSGVIPQRLGINSSLVQLDVTNNKFTGEIPKSICFGKQLSVLNMGLNLLQGSIPSAVGSCSTLRRLILRKNNLTGVLPNFAKNPNLLLLDLSENGINGTIPLSLGNCTNVTSINLSMNRLSGLIPQELGNLNVLQALNLSHNDLGGPLPSQLSNCKNLFKFDVGFNSLNGSFPSSLRSLENLSVLILRENRFTGGIPSFLSELQYLSEIQLGGNFLGGNIPSSIGMLQNLIYSLNISHNRLTGSLPLELGKLIMLERLDISHNNLSGTLSALDGLHSLVVVDVSYNLFNGPLPETLLLFLNSSPSSLQGNPDLCVKCPQTGGLTCIQNRNFRPCEHYSSNRRALGKIEIAWIAFASLLSFLVLVGLVCMFLWYKRTKQEDKITAQEGSSSLLNKVIEATENLKECYIVGKGAHGTVYKASLGPNNQYALKKLVFAGLKGGSMAMVTEIQTVGKIRHRNLVKLEDFWIRKEYGFILYRYMENGSLHDVLHERNPPPILKWDVRYKIAIGTAHGLTYLHYDCDPAIVHRDVKPDNILLDSDMEPHISDFGIAKLLDQSSSLSPSISVVGTIGYIAPENAFTTTKSKESDVYSFGVVLLELITRKRALDPSFMEETDIVGWVQSIWRNLEEVDKIVDPSLLEEFIDPNIMDQVVCVLLVALRCTQKEASKRPTMRDVVNQLTDANAPARGKNS* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1191 1120 Gene3D Ribonuclease Inhibitor 200 318 IPR032675 -
Vvi9g1191 1120 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
Vvi9g1191 1120 Pfam Leucine rich repeat 514 574 IPR001611 GO:0005515
Vvi9g1191 1120 Pfam Leucine rich repeat 228 285 IPR001611 GO:0005515
Vvi9g1191 1120 FunFam Serine/threonine-protein kinase-like protein CCR4 909 1120 - -
Vvi9g1191 1120 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 467 752 - -
Vvi9g1191 1120 ProSiteProfiles Protein kinase domain profile. 832 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1191 1120 Gene3D Phosphorylase Kinase; domain 1 803 908 - -
Vvi9g1191 1120 SUPERFAMILY RNI-like 87 438 - -
Vvi9g1191 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 954 966 IPR008271 GO:0004672|GO:0006468
Vvi9g1191 1120 SUPERFAMILY Protein kinase-like (PK-like) 820 1108 IPR011009 -
Vvi9g1191 1120 Gene3D Ribonuclease Inhibitor 321 488 IPR032675 -
Vvi9g1191 1120 Gene3D Ribonuclease Inhibitor 489 751 IPR032675 -
Vvi9g1191 1120 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Vvi9g1191 1120 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 800 908 - -
Vvi9g1191 1120 SMART serkin_6 832 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1191 1120 FunFam Leucine-rich receptor-like protein kinase family protein 339 437 - -
Vvi9g1191 1120 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 39 198 - -
Vvi9g1191 1120 Pfam Protein kinase domain 837 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1191 1120 Gene3D Transferase(Phosphotransferase) domain 1 909 1118 - -
Vvi9g1191 1120 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 244 333 - -
Vvi9g1191 1120 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Vvi9g1191 1120 SUPERFAMILY RNI-like 404 745 - -
Vvi9g1191 1120 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 477 1103 - -
Vvi9g1191 1120 SMART LRR_typ_2 322 346 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 250 274 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 154 177 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 106 130 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 609 633 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 178 202 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 226 249 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 561 585 IPR003591 -
Vvi9g1191 1120 SMART LRR_typ_2 682 705 IPR003591 -
Vvi9g1191 1120 ProSitePatterns Protein kinases ATP-binding region signature. 838 860 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1191 Vvi-Chr9 19503396 19506855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1191 56 1116 Receptor kinase-like Gene Family AT1G73080 53.073 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi9g1191 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1191 - - vvi:100258774 2205.25