Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1178 ATGAGAAATGCTGGTGGGGAAAACATGTATGTTGCTCTTTTGCATCAGATGTCCAGAGCTTATCCTGTTTGCTTCGCTGTAGTGCCATTTTTTGGTGGCTTTGAATTTTCAAGCAAAGCAGTGAAAACGAGCCGTCTAGGTGCTGGTAATCTGCAGATCCAAGACTTTGTCTTGGAGAAGCCATCCAAAACTCAAATAAAGGGGATGATTATTTCCAATGCTCCTAAGGTCTTGAGACTTCAAGCTGGGCACAAGTACTGCTTGTTGGGCAGGTTTCCATCAGAGGTGGGATGGAACCATTATGAAACTGTTGGATGGCCTCATTTTGCATGGCCACCCTCCTAA 345 0.4493 MRNAGGENMYVALLHQMSRAYPVCFAVVPFFGGFEFSSKAVKTSRLGAGNLQIQDFVLEKPSKTQIKGMIISNAPKVLRLQAGHKYCLLGRFPSEVGWNHYETVGWPHFAWPPS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1178 114 PANTHER TRANSLATION INITIATION FACTOR 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1178 Vvi-Chr9 19131077 19131421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1178 42 104 Cytoplasmic Ribosomal Protein Gene Family AT3G24830 55.556 9.31e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1178 K02872 - vvi:104880402 242.662