Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1155 ATGGTGGACTGCACCGGTGAAGGGGTCTTGTTCATTGAAGCCGATGCGGATACCACACTTGAGAATCTTGGTGATGCAATTCAGCCAATGTGTCCCTGCTTTGAGGAGCTTCTGTATGATGTCCCTGGCTCCACGAGAATTCTTGGTTCCCCTCTTATCTTAATTCAGGTGACCCGATTGAGGTGCGGGGGATTTATATTTGCACTGCGTCTAAACCACACATTGTCTGATGCAGCTGGTTTGATTCAATTCCTCAACACCATAGGCGAGATGGCTCAAGGTCTGTCCGTGCCATCTCTGCTGCCCATATGGCAAAGAGAGCTGTTAAATGCCCGAAATCCGCCACAAATAACCCGTATACATCATGAATACGAGAAGGTAACCAACACCAAGGGCACACTAATGGCCATGGACGAAAATAATTTGGTTCATCGATCCTTCTTCTTTGGCCGTGAGGAGATAAGAGCACTTAGGAACCGACTTCCTGCAAGCCTCGGTGCCTGCTCAACGTTTGAGGTACTAATGGCATGTGTATGGAGATGCCGCACAATTGCATTTGCAGTAGACCCTGATGAGGTTGTTGGCATTTCATGCATAATCAATATGCGAGGCAAGCACGGTTTGGAACTGCCTCCAGGATACTATGGAAATGCTTTTGTGACTCCAGCTTCAATTACTAAGGCTGGAATGCTATGCAAAAATCCATTGGAATTTGCAATAAGGTTAGTGAAGAAAGCCAAGGCGGAAATGAGCCAGGAGTACATTAAATCAGTGGCAGATCTTATGGTCATCAAGGGCCGGCCCTTATTTACGCAGCCAGGGAACTATATTGTTTCAGATGTAACGCGTGCAGGGATTGGAGAGGTCGATTTCGGGTGGGGGAAGCCAGTTTATGGTGGGGTTGCCAAGGCTTCTCCTATTATTAGCTTCCGTATGTGGTTCAGGAACAGCAAAGGAGAAGAAGGGAATGTTATACCTATATGCCTGCCTCCGCCAGTCATGGAAAGGTTTGAACAGGAGCTAAAGAGAATGACCAAAGAGGCAGAGCTGTTAATTACATCCATGCCCTAA 1071 0.4715 MVDCTGEGVLFIEADADTTLENLGDAIQPMCPCFEELLYDVPGSTRILGSPLILIQVTRLRCGGFIFALRLNHTLSDAAGLIQFLNTIGEMAQGLSVPSLLPIWQRELLNARNPPQITRIHHEYEKVTNTKGTLMAMDENNLVHRSFFFGREEIRALRNRLPASLGACSTFEVLMACVWRCRTIAFAVDPDEVVGISCIINMRGKHGLELPPGYYGNAFVTPASITKAGMLCKNPLEFAIRLVKKAKAEMSQEYIKSVADLMVIKGRPLFTQPGNYIVSDVTRAGIGEVDFGWGKPVYGGVAKASPIISFRMWFRNSKGEEGNVIPICLPPPVMERFEQELKRMTKEAELLITSMP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1155 356 Coils Coil 334 354 - -
Vvi9g1155 356 Gene3D - 1 123 IPR023213 -
Vvi9g1155 356 Gene3D - 124 341 IPR023213 -
Vvi9g1155 356 Pfam Transferase family 2 342 - -
Vvi9g1155 356 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1155 Vvi-Chr9 18596864 18598624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1155 2 300 Monolignol Biosynthesis Gene Families AT5G48930 29.167 2.17e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1155 K19861 - vvi:100260288 722.235