Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1151 ATGGCTCTGATACTAGTTGTACGGAATCTCGAAGTCGTTTCCTATCCCAAGACCATGTTAGCAGGTGAGGTACCATGTGAAATTGGTAGCCTTTGTACTCTGAATGTGTTGAATATTGAGGACAACAGCCTAACCGGCCACATTCCTTTTCAAATCTTCAATATCTCATCAATGGTTTCAGGCTCACTGACAAGGAACAACTTATCAGGAAATCTTCCACCAAACTTTGGCTCGTATCTTCCCAATCTTGAAAACCTTATACTGGAAATTAATTGGCTTAGTGGTATTATTCCCAGCTCCATCGGCAATGCTTCTAAGCTTAGGAGTCTGGATTTTGGCTATAACATGCTCACCGGCTCTATACCTCATGCACTTGGGAGTTTAAGATTCCTTGAGAGACTCAATCTAGGAGTTAATAATTTGAAAGGTGAATCTTATATCCAAGAATTGAGTTTTCTCACTTCATTGACAAACTGCAAGCGGCTGAGAATTTTGTACTTATCATTCAATCCTCTAATTGGCATTCTTCCCATTTCTATTGGGAACCTCTCTACCTCTCTTCAACGTTTTGAAGCTAATACATGCAAACTCAAGGGCAACATTCCTACTGAAATTGGAAATTTAAGTAACCTTTATCTGTTATCCTTGAACAACAATGACTTAACTGGAACTATTCCTCCGTCAATTGGACAATTACAGAAGCTCCAAGGTTTGTATCTTCCTTCCAATAAACTACAAGGTTCTATCCCAAATGATATTTGTCAGCTGAGGAACTTAGGTGAGTTATTTTTGACAAATAATCAGCTCTCTGGATCTATACCAGCATGCTTGGGTGAACTTACTTTTCTAAGACATCTATACTTGGGGTCCAACAAACTGAATTCTACAATACCTTCGACTCTATGGAGCTTAATCCATATCTTGTCTTTGGACATGTCCTCAAATTTTCTAGTTGGCTATCTACCATCAGATATGGGAAATTTAAAGGTTCTGGTAAAAATAGATTTGTCAAGGAATCAATTGTCAGGTGAAATTCCAAGTAACATTGGAGGCCTCCAAGATTTAACTTCTCTCTCATTAGCTCATAATAGATTTGAAGGCCCCATATTGCACTCATTTAGCAATTTGAAGAGCTTGGAGTTCATGGATCTATCCGATAATGCTCTATTTGGAGAAATACCGAAATCGTTAGAGGGATTGGTGTATCTAAAATATCTTGATGTGTCTTTCAATGGATTATATGGAGAGATCCCCCCTGAAGGGCCTTTTGCAAACTTCTCAGCCGAATCTTTTATGATGAACAAGGCATTGTGTGGTTCACCAAGGCTGAAACTCCCACCCTGCAGAACCGGCACTCGTTGGTCTACCACAATTTCTTGGCTCCTACTAAAATACATCTTACCGGCAATTTTATCAACACTACTTTTCTTGGCCCTCATTTTTGTGTGGACGAGATGCAGAAAAAGGAATGCAGTCCTTCCAACTCAGTCAGAATCATTACTTACAGCAACATGGAGGAGAATTTCTTACCAAGAAATTTTCCAAGCTACAAATGGATTTAGTGCAGGCAATCTACTTGGTAGAGGAAGTTTGGGGTCGGTATATAGAGGAACTCTTTCAGATGGGAAGAATGCTGCCATCAAGGTTTTCAATTTGCAGGAAGAAGCAGCATTCAAGAGCTTTGATGCAGAATGTGAAGTAATGCACCATATTCGTCATCGAAATCTAATCAAAATTGTTAGCAGCTGCTCTAACTCTTACATTGATTTCAAAGCATTGGTACTGGAGTATGTACCCAATGGAAGTCTGGAGAGGTGGCTGTATTCTCATAACTATTGCTTGGATATCCTGCAGAGATTAAATATAATGATAGATGTTGCATTAGCTATGGAATATCTTCATCACGGTTGTTCAACACCTGTTGTTCACTGTGATTTGAAGCCAAGCAATATCCTGCTAGATGAAGATTTTGGTGGGCACGTTGGTGATTTTGGTATTGCAAAACTCCTACGCGAAGAAGAGTCCATTAGAGAAACACAGACCCTTGCAACCATAGGGTACATGGCACCAAAGTATGTTTCCAATGGAATAGTTACCACTAGTGGTGATGTCTATAGTTATGGTATCGTGTTAATGGAGACGTTTACAAGGAGAAGGCCTACAGATGAAATTTTTTCTGAAGAAATGAGCATGAAGAATTGGGTATGGGATTGGCTATGTGGTTCAATTACTGAAGTGGTGGACGCCAACTTGTTAAGAGGAGAGGATGAACAGTTCATGGCAAAGAAGCAATGTATATCATTAATCTTGGGATTGGCTATGGATTGTGTAGCAGATTCACCTGAGGAGAGGATCAAGATGAAAGATGTTACTAGTGAGGATCTAAGTGACCTAAGAAATTATCGTTGTTGCTAG 2415 0.3959 MALILVVRNLEVVSYPKTMLAGEVPCEIGSLCTLNVLNIEDNSLTGHIPFQIFNISSMVSGSLTRNNLSGNLPPNFGSYLPNLENLILEINWLSGIIPSSIGNASKLRSLDFGYNMLTGSIPHALGSLRFLERLNLGVNNLKGESYIQELSFLTSLTNCKRLRILYLSFNPLIGILPISIGNLSTSLQRFEANTCKLKGNIPTEIGNLSNLYLLSLNNNDLTGTIPPSIGQLQKLQGLYLPSNKLQGSIPNDICQLRNLGELFLTNNQLSGSIPACLGELTFLRHLYLGSNKLNSTIPSTLWSLIHILSLDMSSNFLVGYLPSDMGNLKVLVKIDLSRNQLSGEIPSNIGGLQDLTSLSLAHNRFEGPILHSFSNLKSLEFMDLSDNALFGEIPKSLEGLVYLKYLDVSFNGLYGEIPPEGPFANFSAESFMMNKALCGSPRLKLPPCRTGTRWSTTISWLLLKYILPAILSTLLFLALIFVWTRCRKRNAVLPTQSESLLTATWRRISYQEIFQATNGFSAGNLLGRGSLGSVYRGTLSDGKNAAIKVFNLQEEAAFKSFDAECEVMHHIRHRNLIKIVSSCSNSYIDFKALVLEYVPNGSLERWLYSHNYCLDILQRLNIMIDVALAMEYLHHGCSTPVVHCDLKPSNILLDEDFGGHVGDFGIAKLLREEESIRETQTLATIGYMAPKYVSNGIVTTSGDVYSYGIVLMETFTRRRPTDEIFSEEMSMKNWVWDWLCGSITEVVDANLLRGEDEQFMAKKQCISLILGLAMDCVADSPEERIKMKDVTSEDLSDLRNYRCC* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1151 804 FunFam Serine-threonine protein kinase plant-type 501 597 - -
Vvi9g1151 804 Pfam Protein kinase domain 523 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1151 804 SUPERFAMILY RNI-like 63 418 - -
Vvi9g1151 804 SMART LRR_typ_2 328 352 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 208 232 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 376 400 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 280 304 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 128 154 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 256 279 IPR003591 -
Vvi9g1151 804 SMART LRR_typ_2 80 103 IPR003591 -
Vvi9g1151 804 Gene3D Ribonuclease Inhibitor 4 150 IPR032675 -
Vvi9g1151 804 Gene3D Phosphorylase Kinase; domain 1 500 597 - -
Vvi9g1151 804 SUPERFAMILY Protein kinase-like (PK-like) 495 791 IPR011009 -
Vvi9g1151 804 Gene3D Ribonuclease Inhibitor 151 453 IPR032675 -
Vvi9g1151 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Vvi9g1151 804 Pfam Leucine rich repeat 81 141 IPR001611 GO:0005515
Vvi9g1151 804 Pfam Leucine rich repeat 355 413 IPR001611 GO:0005515
Vvi9g1151 804 Pfam Leucine rich repeat 209 269 IPR001611 GO:0005515
Vvi9g1151 804 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 598 803 - -
Vvi9g1151 804 PANTHER OS04G0122200 PROTEIN 19 785 - -
Vvi9g1151 804 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515
Vvi9g1151 804 ProSiteProfiles Protein kinase domain profile. 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1151 804 SMART serkin_6 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1151 804 FunFam Uncharacterized protein 116 454 - -
Vvi9g1151 804 Gene3D Transferase(Phosphotransferase) domain 1 598 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1151 Vvi-Chr9 18513717 18530111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1151 10 796 Receptor kinase-like Gene Family AT3G47570 38.424 5.97e-168 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vvi9g1151 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1151 - K13420 vvi:100263953 1472.99