Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1130 ATGATTATAAACGTGAGGGAGTCGACGATGGTGCGGCCGGCGGAGGAGACGCCGCGGCGGAGCCTGTGGAACTCGAATGTCGATCTGGTGGTACCGCGGATGCACACGCCAAGCGTCTACTTTTACCGCCCTTCCGGTGCTGCCAACTTCTTCGACCCTCAGGTCATGAAAGAGGCACTGAGCAAGGTTTTGGTGCCATTCTACCCCATGGCCGGGCGGCTCCGGCGAGACGAGGACGGCCGTATCGAGATCGACTGCAACGCTGAGGGCGTCCTCTTCGTCGAGGCGGATACCGGCTCTGTCATCGACGATTTCGGTGATTTCGCCCCTACTCTGGAGCTCCGGCAACTCATTCCGACGGTGGATTACTCCGGCGACATTGGATCCTATTCTCTCCTCATACTGCAGGTAACACATTTCAAATGTGGTGGAGTGTCGTTAGGCGTGGGTATGCAGCACCACGTAGCGGACGGTGCGTCTGGGCTGCACTTCATAAACACGTGGTCAGACATGGCGCGTGGTTTGGACATCACCATCCCTCCCTTCATCGACCGCACCCTCCTACGGGCCCGCGACCCACCCCAGCCTGCTTTCCACCACATTGAGTACCAACCCCCTCCCCAGCTCAAAACCCCACTACCCAACACTCAGAACACCAATGTTTGCATCTTCAGGATCACCCGGGACCAGCTCAACACCCTCAAGAACAAATCAAAAGAAGATGGCAACACAATCAGTTATAGCTCCTACGTCATGCTTGCCGGCCACGTCTGGCGCTGCGCCTGCAAGGCACGGTCCCTACCCGCCGACCAAGACAGCAAGATGTATATCGCCACCGACGGTCGCTCACGCCTCCGCCCCGCCTTGCCCCCTGGATACTTCGGAAACGTCATATTCACGACGACGCCGGTGGCCGTCGCTGGAGAATTGATGTCCAAACCGCTGTGGTACGCCGCCAGCAAGATCCACAACGCACTGGCGAGGATGGATGACGAGTATTTAAGGTCAGCCTTGGACTACCTGGAGTTACAGCCAGATCTAACGGCTCTGGTGCGCGGTGCCCACACCTTTCGGTGCCCAAATATCGGGATAACGAGTTGGACCAGGTTACCGATCTACGACGCGGACTTCGGGTGGGGTCGGCCCATTTTCATGGGCCCGGGTGGGATCGCATTGGAGGGCCTGGCCTTTGCGCTGCCCAGCCCAACCAACGATGGGAGCTTGTCCATCGCCATTTCGCTGCAGGAGGATCATATGAAACTCTTCCAGAAGTACCTATACGAGATTTAA 1290 0.5783 MIINVRESTMVRPAEETPRRSLWNSNVDLVVPRMHTPSVYFYRPSGAANFFDPQVMKEALSKVLVPFYPMAGRLRRDEDGRIEIDCNAEGVLFVEADTGSVIDDFGDFAPTLELRQLIPTVDYSGDIGSYSLLILQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDMARGLDITIPPFIDRTLLRARDPPQPAFHHIEYQPPPQLKTPLPNTQNTNVCIFRITRDQLNTLKNKSKEDGNTISYSSYVMLAGHVWRCACKARSLPADQDSKMYIATDGRSRLRPALPPGYFGNVIFTTTPVAVAGELMSKPLWYAASKIHNALARMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWTRLPIYDADFGWGRPIFMGPGGIALEGLAFALPSPTNDGSLSIAISLQEDHMKLFQKYLYEI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1130 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 427 - -
Vvi9g1130 429 Gene3D - 212 429 IPR023213 -
Vvi9g1130 429 Pfam Transferase family 3 426 - -
Vvi9g1130 429 Gene3D - 1 205 IPR023213 -
Vvi9g1130 429 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Vvi9g1130 429 FunFam Tryptamine hydroxycinnamoyl transferase 207 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1130 Vvi-Chr9 18035654 18038003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1130 1 429 Monolignol Biosynthesis Gene Families AT5G48930 78.984 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1130 K13065 - vvi:100265530 881.322