Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1114 ATGGATGCTCAAGCATGGAAGAAGGCTTTGTATCGAGCCAAATTGAAAAACTTAGAAGAAAAGAAGGTCAAGCGCATCGAATCACCTCTTGTAAGGTACAATGAATTTGATCAACCTGTCTGTAGGGTCTGTGATGTCATTTTGAAATCTGAATCCCTATGGGATGCACACCAAGCTTCTCGTAAACATCATGAGGTGATGCTTACTGTCCTAGTTATGTTATGA 225 0.4044 MDAQAWKKALYRAKLKNLEEKKVKRIESPLVRYNEFDQPVCRVCDVILKSESLWDAHQASRKHHEVMLTVLVML* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1114 74 SUPERFAMILY beta-beta-alpha zinc fingers 33 66 IPR036236 -
Vvi9g1114 74 Gene3D Classic Zinc Finger 33 71 - -
Vvi9g1114 74 PANTHER UNCHARACTERIZED 1 67 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1114 74 Pfam Zinc-finger of C2H2 type 40 63 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1114 1 67 C2H2 Transcription Factor Family AT3G02860 73.134 4.42e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1114 K13104 - vvi:104880399 139.043