Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1090 ATGCATAGATTATCGCATAGTGCAATTAAAAATGTCAAAGCCAATGCTGCTGGACTAACTCGGGCTAACAATGCAAAACCTGAGGCCCCTAAACCTGAGTCCTCAACTGTATTGTCTAATGCTACATCTGAACCCTCTATGAATTTGCAGAAGGCTCAGCTATCATCTGGGCTTCCTGCAGATTTTTTTGATAATCATGTGACAAAGAAGCAAAAATCTGGAAATGATGATGTCAAGTTCCTAGATCCAGATTCATACAACAAGACTGGGGGTTCTGCTTCTGCTCAAACTCAGTCAATGGAGCCTCTTGAGTCGAAAAACAATTTAGACGGATTGTCCAGTTCTCACTCTGAAAAGATGGGAAAAAGTGGAATTCGTCATGCCAGGGACCTTACCCAGACATCAGGAAAGATTGTTGGTTCAGAAACCAAGGAAGTAAAGGGTGCTCTTCCTGAAGGCTTCTTTGATAACAAGGATGCTGACCTTCGTGCACGTGGCATTGTGCCTGTTAAGCCGGATGTCAAGGACGAGTACAAAGAATTTGAAAAGTTGATACAGGAGGATTTGAAGGAGGTGGACAACCGTTTGGAAGAAGAAGAGTTTGATGCAGCTGAGATGATTGAAGAGGCCGAGTCTGTGGAGCAAAAGGTGTATTGGGAGAAAGTGGAAATGCTGAAGAAGAAGAAATTGGAGCTGAAGGCGGCCAGATCCGGCAGACGGAGTAAAGATCCTGAGGTCAGAGGCAAGGGGCAAAGCTCTAAAGGGGATTCATCCAGTGGTGATGATAGTGATGGGAATTTCACAGTTGATTGGAGAGCACAACACCTGTGA 831 0.4465 MHRLSHSAIKNVKANAAGLTRANNAKPEAPKPESSTVLSNATSEPSMNLQKAQLSSGLPADFFDNHVTKKQKSGNDDVKFLDPDSYNKTGGSASAQTQSMEPLESKNNLDGLSSSHSEKMGKSGIRHARDLTQTSGKIVGSETKEVKGALPEGFFDNKDADLRARGIVPVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKKKLELKAARSGRRSKDPEVRGKGQSSKGDSSSGDDSDGNFTVDWRAQHL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1090 276 Coils Coil 189 216 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 29 55 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 87 119 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 1 143 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 233 276 - -
Vvi9g1090 276 PANTHER UNCHARACTERIZED 3 276 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1090 276 MobiDBLite consensus disorder prediction 233 250 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 65 83 - -
Vvi9g1090 276 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1090 Vvi-Chr9 17264350 17269670 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1090 3 276 C2H2 Transcription Factor Family AT3G02860 43.116 3.92e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1090 K13104 - vvi:100243234 375.941