Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1088 ATGCTTACTGTCCTAGTTATCCAAAATGACTCAAGTTGGGCCCTGAAGCCCTTTGAAACACCCTTTCAGGTGGTTAAGAAAGCAAAAGGTGTTTGGTCTGTTAAGCTGACAAGTTTTCTAGAAAAACCAAATCCAGATTCATACAACAAGACTGGGGGTTCTGCTTCTGCTCAAACTCAGTCAATGGAGCCTCTTGAGTCGAAAAACAATTTAGACAGATTGTCCAGTTCTCACTCTGAAAAGATGGGAAAAAGTGGAATTCATCATGCCAGGGACCTTACCCAGACATCAGGAAAGATTGTTGGTTCAGAAACCAAGGAAGTAAAGGGTGCTCTTCCTGAAGGCTTCTTTGACAACAAGGATGCTGACCTTCGTGCACGTGGTATTGTGCCTGTTAAGCCGGATGTCAAGGACGAGTACAAAGAATTTGAAAAGTTGATACAGGAGGATTTGAAGGAGGTGGACAACCGTTTGGAAGAAGAAGAGTTTGATGCAGCTGAGATGATTGAAGAGGCCGAGTCTGTGGAGCAAAAGTAA 537 0.4358 MLTVLVIQNDSSWALKPFETPFQVVKKAKGVWSVKLTSFLEKPNPDSYNKTGGSASAQTQSMEPLESKNNLDRLSSSHSEKMGKSGIHHARDLTQTSGKIVGSETKEVKGALPEGFFDNKDADLRARGIVPVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1088 178 MobiDBLite consensus disorder prediction 41 72 - -
Vvi9g1088 178 MobiDBLite consensus disorder prediction 73 88 - -
Vvi9g1088 178 PANTHER UNCHARACTERIZED 43 178 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1088 178 Coils Coil 151 178 - -
Vvi9g1088 178 MobiDBLite consensus disorder prediction 41 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1088 Vvi-Chr9 17221516 17227285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1088 95 169 C2H2 Transcription Factor Family AT3G02860 67.105 2.53e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1088 K13104 - vvi:100260334 257.299