Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1085 ATGATTGAAGAGGCCGAGCCTGTGGAGCAAAAGGTGTATTGGGAGAAAGTGGAAATGCTGAAGAAGAAGAAATTGGAGCTGAAGGCAGCTAGATCCAGCAGACGGAGTAAAGAGCCTGAGGTCAGAGGCAAGGGGCATAGCTCTAAAGAGGATTCATCCAGTGATGATGATAGTGATGGGAATTTCATGGTTGATTGGAGAGCACAACACCTGTGA 216 0.4722 MIEEAEPVEQKVYWEKVEMLKKKKLELKAARSSRRSKEPEVRGKGHSSKEDSSSDDDSDGNFMVDWRAQHL* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1085 71 PANTHER UNCHARACTERIZED 1 71 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1085 71 MobiDBLite consensus disorder prediction 26 71 - -
Vvi9g1085 71 MobiDBLite consensus disorder prediction 26 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1085 Vvi-Chr9 17182373 17182669 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1085 13 71 C2H2 Transcription Factor Family AT3G02860 55.000 8.09e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1085 K13104 - vvi:100260334 100.523