Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1082 ATGAGCCCTATCAGGGCAATTAAAAATGTCAAAGCCAATGCTGCTGGACTAACTCGGGCTAACAATGCAAAACCTGAGGCCCCTAAACCTGAGTCCTCAACTGTATTGTCTAATGCTACATCTGAACCCTCTATGAATTTGCAGAAGGCTCAGCTATCATCTGGGTTTCCTGCAGATTTTTTTGATAATCATGTGACAAAGAAGCAAAAATCTGGAAATGATGATGTCAAGTTCCTAGATCCAGATTCATACAACAAGACTGGGGGTTCTGCTTCTGCTCAAACTCAGTCAATGGAGCCTCTTGAGTCGAAAAACAATTTAAACGGATTGTCCAGTTCTCACTCTGAAAAGATGGGAAAAAGTGGAATTCGTCATGCCAGGGACCTTACCCAGACATCAGGAAAGATTGTTGGTTCAGAAACCAAGGAAGTAAAGGGTGCTCTTCCTGAAGGCTTCTTTGACAACAAGGATGCTGACCTTCGTGCACGTGGTATTGTGCCTGTTAAGCCGGATGTCAAGGACGAGTACAAAGAATTTGAAAAGTTGATTCAGGAGGATTTGAAGGAGGTGGACAACCGTTTGGAAGAAGAAGAGTTTGATGCAGCTGAGATGATTGAAGAGGCCGAGCCTGTGGAGCAAAAGGACGAGTACAAAGAATTTGAAAAGTTGATACAGGAGGATTTGAAGGAGGTGGACAACCGTTTGGAAGAAGAAGAGTTTGATGCAGCTGAGATGATTGAAGAGGCCGAGTCTGTGGAGCAAAAGGTGTATTGGGAGAAAGTGGAAATGCTGAAGAAGAAGAAATTGGAGCTGAAGGCGGCTAGATCCGGCAGACAGAGTAAAGAGCCTGAGGTCAGAGGCAAGGGGCATAGCTCTAAAGAGGATTCATCCAGTGATGATGATAGTGATGGGAATTTCATGGTTGATTGGAGAGCACAACACCTGTGA 948 0.4451 MSPIRAIKNVKANAAGLTRANNAKPEAPKPESSTVLSNATSEPSMNLQKAQLSSGFPADFFDNHVTKKQKSGNDDVKFLDPDSYNKTGGSASAQTQSMEPLESKNNLNGLSSSHSEKMGKSGIRHARDLTQTSGKIVGSETKEVKGALPEGFFDNKDADLRARGIVPVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAEPVEQKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKKKLELKAARSGRQSKEPEVRGKGHSSKEDSSSDDDSDGNFMVDWRAQHL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1082 315 MobiDBLite consensus disorder prediction 85 117 - -
Vvi9g1082 315 PANTHER UNCHARACTERIZED 6 215 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1082 315 MobiDBLite consensus disorder prediction 65 81 - -
Vvi9g1082 315 MobiDBLite consensus disorder prediction 272 307 - -
Vvi9g1082 315 Coils Coil 228 255 - -
Vvi9g1082 315 MobiDBLite consensus disorder prediction 27 51 - -
Vvi9g1082 315 Coils Coil 187 207 - -
Vvi9g1082 315 MobiDBLite consensus disorder prediction 65 141 - -
Vvi9g1082 315 MobiDBLite consensus disorder prediction 1 51 - -
Vvi9g1082 315 MobiDBLite consensus disorder prediction 272 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1082 Vvi-Chr9 17140839 17146933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1082 6 315 C2H2 Transcription Factor Family AT3G02860 37.500 6.69e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1082 K13104 - vvi:100260334 402.519