Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1080 ATGAATTTGCAGAAGGCTCAGCTATCATCTGGGCTTCCTGCAGATTTTTTTGATAATCATGTGACAAAGAAGCAAAAATCTGGAAATGATGCGGTCAAGTTCCTAGATCCAGATTCATACAACAAGACTGGGGGTTCTGCTTCTGCTCAAACTCAGTCAATGGAGCCTCTTGAGTCGAAAAACAATTTAGACAGATTGTCCAGTTCTCACTCTGAAAAGATGGGAAAAAGTGGAATTCATCATGCCAGGGACCTTACCCAGACATCAGGAAAGATTGTTGGTTCAGAAACCAAGGAAGTAAAGGGTGCTCTTCCTGAAGGCTTCTTTGACAACAAGGATGCTGACCTTCGTGCACGTGGTATTGTGCCTGTTAAGCCGGATGTCAAATTGTCCAGTTCTCACTCTGAAAAGATGGGAAAAAGTGGAATTCATCATGCCAGGGACCTTACCCAGACATCAGGAAAGATTGTTGGTTCAGAAACCAAGGAAGTAAAGGGTGCTCTTCCTGAAGGCTTCTTTGACAACAAGGATGCTGACCTTCGTGCACGTGGTATTGTGCCTGTTAAGCCGGATGTCAAGGACGAGTACAAAGAATTTGAAAAGTTGATACAGGAGGATTTGAAGGAGGTGGACAACCGTTTGGAAGAAGAAGAGTTTGATGCAGCTGAGATGATTGAAGAGGCCGAGTCTGTGGAGCAAAAGGTGTATTGGGAGAAAGTGGAAATGCTGAAGAAGAAGAAATTGGAGCTGAAGGCGGCTAGATCCGGCAGACGGAGTAAAGAGCCTGAGGTCAGAGGCAAGGGGCATAGCTCTGAAGAGGATTCATCCAGTGATGATGATAGTGATGGGAATTTCATGGTTGATTGGAGAGCACAACACCTGTGA 885 0.4508 MNLQKAQLSSGLPADFFDNHVTKKQKSGNDAVKFLDPDSYNKTGGSASAQTQSMEPLESKNNLDRLSSSHSEKMGKSGIHHARDLTQTSGKIVGSETKEVKGALPEGFFDNKDADLRARGIVPVKPDVKLSSSHSEKMGKSGIHHARDLTQTSGKIVGSETKEVKGALPEGFFDNKDADLRARGIVPVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKKKLELKAARSGRRSKEPEVRGKGHSSEEDSSSDDDSDGNFMVDWRAQHL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1080 294 MobiDBLite consensus disorder prediction 65 80 - -
Vvi9g1080 294 MobiDBLite consensus disorder prediction 130 144 - -
Vvi9g1080 294 MobiDBLite consensus disorder prediction 251 274 - -
Vvi9g1080 294 Coils Coil 207 234 - -
Vvi9g1080 294 PANTHER UNCHARACTERIZED 132 294 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vvi9g1080 294 MobiDBLite consensus disorder prediction 251 294 - -
Vvi9g1080 294 MobiDBLite consensus disorder prediction 28 93 - -
Vvi9g1080 294 MobiDBLite consensus disorder prediction 41 64 - -
Vvi9g1080 294 MobiDBLite consensus disorder prediction 127 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1080 Vvi-Chr9 17120079 17124080 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1080 6 294 C2H2 Transcription Factor Family AT3G02860 42.268 2.24e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1080 K13104 - vvi:100260334 526.554