Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1076 ATGGCGGATCTCAAAGAACGCCTGCTGCCACCAAAACCTGCATCAGCTGTGAATCTTAGAGAAGCGTCATATCGACCAACTGCCTCTGGGCGTCAGCCTTTTCAAGGCATGGATTTTCTAGGACTGAAGAAGCGTGGCCAAGGTGTTCGATCATGGATACGTGTCGATGCATCGGGAAATTCCCAGATTATTGAGGTTGACAAGTTCACTGTTATGCGCCGCTGTGATCTTCCTGCTCGTGATCTTCGCCTACTAGATCCACTGTTTGTTTACCCCTCAACAATTCTTGGTAGAGAGAAGGCTATTGTTGTAAATCTAGAGCAGATTCGATGTATTATCACAGCTGATGAGGTTCTGCTCTTGAACTCCCTTGATAGCTATGTATTGCAGTATGTGGTGGAGTTACAACGGCGATTGACAGCACCTGCAATGGGTGAGGGTTGGCAAATGGAAGATGCTGACTTGAACCGAAGGAGAGGATGTAGCAATTTTGACAATGGGTTCGTGAACACATCACCTGATTACTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCTTGGAGGCAGCTTGCACATTTCTTGATGCTCAGGCAGCTGAATTAGAAATTGAAGCATATCCTCTGCTGGATGAACTTACATCAAAGATCAGTACCTTAAACTTGGAACGTGCACGTCGATTGAAAAGCAGACTTGTTGCTTTGACTCGAAGAGTTCAAAAGGTTAGGGATGAGATAGAGCAATTAATGGATGATGATGGAGACATGGCTGAAATGTATCTCACCGAGAAGAAAAGGCGGATGGAATCATCATTCTATGGTGAGCAGTCTTTGATGGGATACAGATCAATTGATGGTGCACTCTCTGTTTCTGCTCCAGTTTCTCCTGTTTCTTCACCTCCTGAGACACGGAGGCTTGAAAAAAGCTTAAGCGTCACAAGGAGCCGGCATGAAAGTATGAAGAGTTCAGAGAGTGCAACAGAGAGTATAGAAGAGTTGGAGATGTTGTTGGAAGCATATTTTGTTGTCATTGATAGCACCCTCAACAAGCTAACTTCGCTGAAGGAATACATTGATGACACAGAAGATTTCATTAACATTCAGCTGGATAATGTCCGAAACCAGCTGATCCAATTTGAGCTACTACTCACAACAGCAACTTTTGTTGTTGCCATCTTTGGGGTTGTAGCAGGCATATTTGGTATGAATTTTGAAATACCAATGTTCGATGACCCGGGTGCATTCAAGTGGGTTCTTATAATCACAGGAATATGTGGAATCATTATATTCTGTTCATTTGTGTGGTTTTTCAAATACAGAAGACTCATGCCGCTGTAG 1335 0.4367 MADLKERLLPPKPASAVNLREASYRPTASGRQPFQGMDFLGLKKRGQGVRSWIRVDASGNSQIIEVDKFTVMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAPAMGEGWQMEDADLNRRRGCSNFDNGFVNTSPDYLPFEFRALEVALEAACTFLDAQAAELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFYGEQSLMGYRSIDGALSVSAPVSPVSSPPETRRLEKSLSVTRSRHESMKSSESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFDDPGAFKWVLIITGICGIIIFCSFVWFFKYRRLMPL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1076 444 Gene3D Magnesium transport protein CorA, transmembrane region 123 375 - -
Vvi9g1076 444 Gene3D - 40 122 - -
Vvi9g1076 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 442 IPR039204 -
Vvi9g1076 444 FunFam Magnesium transporter MRS2-1 382 442 - -
Vvi9g1076 444 CDD Mrs2_Mfm1p-like 52 441 IPR039204 -
Vvi9g1076 444 MobiDBLite consensus disorder prediction 306 325 - -
Vvi9g1076 444 FunFam Magnesium transporter MRS2-1 40 123 - -
Vvi9g1076 444 Pfam CorA-like Mg2+ transporter protein 312 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi9g1076 444 Coils Coil 224 251 - -
Vvi9g1076 444 MobiDBLite consensus disorder prediction 292 325 - -
Vvi9g1076 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 442 - -
Vvi9g1076 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 434 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1076 Vvi-Chr9 16818424 16825899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1076 1 444 MRS2 Gene Family AT1G16010 84.045 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1076 K16075 - vvi:100267379 832.402