Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1053 ATGTCACAGAGAGTAGCTGCAGAGACTTGCCCACCAAAAGTGGTGGTGGTGAGGGAGTTCGATGAAGGGAGGGACAAGGCTGCTGTGGAGGAGATGGAGAAGAGGTGCGAAATCGGGCAGCGGGGCAAGCCTTCGCTCGTCACCGACCTTATGGGTGATCCCATTTGTCGCATCCGTCACTTTTCAACACATGTCATGCTAGTTGCAGAGTATGGAGAAGAGAGGCGAGTAGTGGGGGTTGTGAGGGGGTGTGTAAAAACTGTGACAAGAGGAAAGAGCATGTATGTAAAGGTGGCTTATATTCTGGGCCTAAGGGTCTGTCCTGCCCACAGGCGTCTTGGTATTGGCACAAAGCTGGTTCAACATCTAGAAAAATGGTGTGAGCGAAATGGCGCAGAGTACGCATACATGGCCACAGACTGCACCAATGAGCCCTCCATTAATCTATTCACAAAAAAATGCTCATACGCCAAGTTCCGAACTCCCACCATGCTGGTGCAGCCGGTCCATGCCCATTACAAGCCACTGCCTTCTTCTAAAACTCTCATCCTTCCACTCCCTCCCCAGCTTGCAGAGTTAATCTATCGTCGAATCTTCGCCAACTCTGAATTTTTTCCGAAAGATATAGACCAAATTTTGACCAACAAACTTAATTTAGGCACATTCATCGCCCTCCCCAAAAAATCAAACTTCAAATGCAACCCTTCAAATAATAATAATAATCTTCTACTTCTACCACCCACCTTTGCAATCCTCAGCGTGTGGAACACCAAGGATGTGTTCAAACTGCAACTCAAGGGGGCCTCACCCCTGACATACGCCTGGTGCGCTGGGACCAGGGCCCTGGACGCCTATCTCCCCTGGCTACACTTTCCGTCCATTCCCAATGTTTTCAAACAGTTCGGCGTATACTTTTTACACGGTTTGCACATGGAAGGAAAGCACGGCTTGCGGCTCATGAAGTCTCTCTGCGCCTTTGCCCACAACATGGCTAGAGATGATGCCGGATGCGGGGCGCTGGTGGCGGAGGTGGCCCACAGGGACCCAGTCAGAGACGGCATCCCCCATTGGAGCAAATTTTCATGGGCCGAGGACCTGTGGTGCATCAAGAAGTTTACACCTGCCAACCACCATCCCGACGATGATTGGGTTACATCTCGCCCAGCTTCCCCTGTCATTTTTGTTGACCCTCGTGATTTTTGA 1203 0.5071 MSQRVAAETCPPKVVVVREFDEGRDKAAVEEMEKRCEIGQRGKPSLVTDLMGDPICRIRHFSTHVMLVAEYGEERRVVGVVRGCVKTVTRGKSMYVKVAYILGLRVCPAHRRLGIGTKLVQHLEKWCERNGAEYAYMATDCTNEPSINLFTKKCSYAKFRTPTMLVQPVHAHYKPLPSSKTLILPLPPQLAELIYRRIFANSEFFPKDIDQILTNKLNLGTFIALPKKSNFKCNPSNNNNNLLLLPPTFAILSVWNTKDVFKLQLKGASPLTYAWCAGTRALDAYLPWLHFPSIPNVFKQFGVYFLHGLHMEGKHGLRLMKSLCAFAHNMARDDAGCGALVAEVAHRDPVRDGIPHWSKFSWAEDLWCIKKFTPANHHPDDDWVTSRPASPVIFVDPRDF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1053 400 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 152 IPR016181 -
Vvi9g1053 400 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 187 IPR000182 GO:0016747
Vvi9g1053 400 Pfam Acetyltransferase (GNAT) family 59 155 IPR000182 GO:0016747
Vvi9g1053 400 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 400 - -
Vvi9g1053 400 CDD NAT_SF 97 136 - -
Vvi9g1053 400 Gene3D - 21 160 - -
Vvi9g1053 400 FunFam Putative N-acetyltransferase HLS1 30 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1053 Vvi-Chr9 16169584 16171633 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi9g1053 Acetyltransf_1 7.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1053 - - vvi:100246729 781.556