Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1038 ATGACTGATCGGCTAGAAGGAGAATGCGATACGCAAACTCCAGGTCAAACCACTCATGGGCGACCAAGTGATGAAAGCTCAGCTAAGAGCTGGAAAGACTCTGGGTCTATAGGAAATGATAGCTCAGGGCTGGCGGGCTCAGGGCCTAAGGAAAAAAAGATAGCTCAGGGCTATAAGACTCAGGGTCTAAAAGGAATGGGTAACTCATGGCTACGAGGCTCAGGGCCTAAAAAAAAGGATAGCTCAGGGCTAGCGGGCTCAGGGCCTAAGGGAAAAAGGATGCTCAAGGCTATAAGACTCGGGATAAATCAGAGAGTACTATGGCTGCATTTTGAAAGAGATAAAGTGACTGCCAAATGGTGTTTTAGTTTAGATGAAGATGCCTTTCTATTGCATTTAAAGGACGGTCTCTCCCCTGAAACAAAGGTTATTTATGTGGGGTCTCTCAAGGTTGAAATAGATGCAAGTGAACAGGAAGAAGTTGCACAGAAACTGCTGGAGGATTTCAATTGTGTACCAATATTTTTACCTCATGACCTGCATGAAGGTTTTATCATGGGTTCTCTAAACATCGGCTATGACCTCTTTTTCATTACATGTTGCTCATGTGCCCCGACCATGGCGATCATTTTGACAACAAGTGAGCACGTGCTTTGA 657 0.449 MTDRLEGECDTQTPGQTTHGRPSDESSAKSWKDSGSIGNDSSGLAGSGPKEKKIAQGYKTQGLKGMGNSWLRGSGPKKKDSSGLAGSGPKGKRMLKAIRLGINQRVLWLHFERDKVTAKWCFSLDEDAFLLHLKDGLSPETKVIYVGSLKVEIDASEQEEVAQKLLEDFNCVPIFLPHDLHEGFIMGSLNIGYDLFFITCCSCAPTMAIILTTSEHVL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1038 218 MobiDBLite consensus disorder prediction 7 43 - -
Vvi9g1038 218 MobiDBLite consensus disorder prediction 1 90 - -
Vvi9g1038 218 Pfam Glycosyltransferase family 20 110 183 IPR001830 GO:0003824|GO:0005992
Vvi9g1038 218 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 97 187 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g1038 Vvi-Chr9 15737103 15740673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g1038 99 187 Trehalose Biosynthesis Gene Families AT1G60140 57.303 1.81e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1038 K16055 - vvi:100246842 145.206