Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0999 ATGCTTATGTGCAAGCAAACACAGCCTCTACTCAGTATGCCTCCCGGAGGGCTCACCATGGCTGTCTCCAGCCATCGGTGGCTCAAGGAGAAGGTGGCGGTTGTAATGGGGGCGACCGGTACAGGGAAGTCGCGGCTCTCCATCGACCCCGCCACCAGGTTTCCCGCAGAGATTGTGAACTCGCACAAAATGCAAGTCTACGAAGGACTAGACATCATCACCAACAAGATCACAGAGGAGGAGCAGCCCGGCGCTCCTCACCATCACCTCGGGATAGCGCATCCTAATGTGGATTTCACTGCATCCGATTTTCGGGACATGGCCTCACTCTCCATTGAATCCATCCTCGGTGGAAGGCGCCTCCCAATCATCGTTGGGGGCTCCAATTCATACATTGATGCCCGATACGAGTGCTGCTTCCTCTGGGTGGACGTCTCCCGGCCGGTCCTTCACTCATTCGTCTCCAAACGGGTCGACAAGATGGTCGGGAATGGAATGGTGGAAGAAGTTGAACAACTGTTCTATCCAAATGCAGACTACACGAGGGGGATAAGGAGAGCTATTGGGGTTCCGGAGCTCGATCTATATTTCCCAACGGGTTTCCTGGACGAAGAAGCTCGAGCTAAGGTTTTGCAGGAGGCGGTGCATGAGATCAAGGCTAACACATGCAAGCTTGCCTGTCGCCAATTGGAGGGGATTCATCGGCTCAAGAACCTCCGGAAATGGAAGATTCACCGGCTGGACGCCACTGAAGTGTTCCTAAAGCACGATAGAGAGGCTGATGAAGCATGGGAGAAGCTGGTGGCGAGGCCGAGCACCATGATGGTGGCGCAATTCCTCTACAGTGTGGGCGCCACCAGAGTCGCCACCGAAGAGATGGTGAGGAACGCCGCGCTGCTCCTCCTCTGTGATCTTGTTGGTGACGATGTCTAG 933 0.552 MLMCKQTQPLLSMPPGGLTMAVSSHRWLKEKVAVVMGATGTGKSRLSIDPATRFPAEIVNSHKMQVYEGLDIITNKITEEEQPGAPHHHLGIAHPNVDFTASDFRDMASLSIESILGGRRLPIIVGGSNSYIDARYECCFLWVDVSRPVLHSFVSKRVDKMVGNGMVEEVEQLFYPNADYTRGIRRAIGVPELDLYFPTGFLDEEARAKVLQEAVHEIKANTCKLACRQLEGIHRLKNLRKWKIHRLDATEVFLKHDREADEAWEKLVARPSTMMVAQFLYSVGATRVATEEMVRNAALLLLCDLVGDDV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0999 310 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 147 244 - -
Vvi9g0999 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 178 IPR027417 -
Vvi9g0999 310 Pfam IPP transferase 135 231 - -
Vvi9g0999 310 Pfam IPP transferase 65 134 - -
Vvi9g0999 310 Gene3D - 29 280 IPR027417 -
Vvi9g0999 310 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 279 IPR039657 -
Vvi9g0999 310 FunFam Adenylate isopentenyltransferase 5, chloroplastic 147 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0999 Vvi-Chr9 14301813 14302745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0999 134 310 C2H2 Transcription Factor Family AT2G27760 26.923 5.78e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0999 K10760 - vvi:100261184 602.053