Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g0981 | ATGGATAAGAAGACCAGTTTCCTTAACAAGATCAAGAAGGCCACATGCCTAGACTCATCTACTCCAGACTCTGGAAAAGGGAAATGTAAATCATGTAGTAACATTGTTGCTCACGGATTCCACTTGGTAGAAGGGAAATCAGGTCATGATATGGAGGACTACCATGTTGCAGAATACAGAAATAAGAAGAGCCATGTACTTGGATTATTTGCCATCTTTGATGGCCATCTTGGTAACAGTGTGCCAAGTTATTTGAAAGATAACCTTTTCAATAATATACTTGAGGAGCCGAACTTCTGGAATGACCCCAAGATTGCAATAAAAAATGCATATCGTGCCACTGATAAATATATTCTGGAGAACTCCATGAAATTAGGTCCTGGTGGCTCAACGGCAGTAACTGCAATAGTTATTGATGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCCAGAGCTGTCGTCTGTGAAAGGGGCGCTGCCAATCAGCTAACTGTTGACCATGAGCCAGACAGTGAACGAAGAAGAATTGAGAAACAAGGTGGCTTTGTGACTAATCTTGCTGGAGATGTGCCTCGAGTTAATGGCCAATTGGCAGTTGCACGTGCTTTTGGGGATCAAAGCCTTAAAGCACATTTAAGTTCGGAGCCTGATGTTATGAAAAACCAGGAGGCAGTTGATATGGTGAAATCCATTAAAGATCCTCAAGTAGCAGCCAAACGTCTAACAACAGAAGCATTGGAAAGAAAGAGCAAAGATGATATATCGTGCATCGTGATCCGTTTCGGATGA | 792 | 0.4217 | MDKKTSFLNKIKKATCLDSSTPDSGKGKCKSCSNIVAHGFHLVEGKSGHDMEDYHVAEYRNKKSHVLGLFAIFDGHLGNSVPSYLKDNLFNNILEEPNFWNDPKIAIKNAYRATDKYILENSMKLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGAANQLTVDHEPDSERRRIEKQGGFVTNLAGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVMKNQEAVDMVKSIKDPQVAAKRLTTEALERKSKDDISCIVIRFG* | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g0981 | 263 | SMART | PP2C_4 | 33 | 260 | IPR001932 | - | |
Vvi9g0981 | 263 | ProSiteProfiles | PPM-type phosphatase domain profile. | 37 | 262 | IPR001932 | - | |
Vvi9g0981 | 263 | CDD | PP2Cc | 51 | 262 | IPR001932 | - | |
Vvi9g0981 | 263 | Gene3D | - | 32 | 263 | IPR036457 | - | |
Vvi9g0981 | 263 | PANTHER | PROTEIN PHOSPHATASE | 218 | 261 | IPR015655 | GO:0004722|GO:0006470 | |
Vvi9g0981 | 263 | FunFam | Probable protein phosphatase 2C 39 | 27 | 221 | - | - | |
Vvi9g0981 | 263 | Pfam | Protein phosphatase 2C | 49 | 219 | IPR001932 | - | |
Vvi9g0981 | 263 | SUPERFAMILY | PP2C-like | 30 | 263 | IPR036457 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi9g0981 | Vvi-Chr9 | 13760895 | 13784503 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi9g0981 | 25 | 262 | PP2C-type Phosphatase Gene Family | AT4G28400 | 60.769 | 3.06e-110 | 317 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g0981 | K17506 | - | vvi:100258467 | 519.235 |