Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0981 ATGGATAAGAAGACCAGTTTCCTTAACAAGATCAAGAAGGCCACATGCCTAGACTCATCTACTCCAGACTCTGGAAAAGGGAAATGTAAATCATGTAGTAACATTGTTGCTCACGGATTCCACTTGGTAGAAGGGAAATCAGGTCATGATATGGAGGACTACCATGTTGCAGAATACAGAAATAAGAAGAGCCATGTACTTGGATTATTTGCCATCTTTGATGGCCATCTTGGTAACAGTGTGCCAAGTTATTTGAAAGATAACCTTTTCAATAATATACTTGAGGAGCCGAACTTCTGGAATGACCCCAAGATTGCAATAAAAAATGCATATCGTGCCACTGATAAATATATTCTGGAGAACTCCATGAAATTAGGTCCTGGTGGCTCAACGGCAGTAACTGCAATAGTTATTGATGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCCAGAGCTGTCGTCTGTGAAAGGGGCGCTGCCAATCAGCTAACTGTTGACCATGAGCCAGACAGTGAACGAAGAAGAATTGAGAAACAAGGTGGCTTTGTGACTAATCTTGCTGGAGATGTGCCTCGAGTTAATGGCCAATTGGCAGTTGCACGTGCTTTTGGGGATCAAAGCCTTAAAGCACATTTAAGTTCGGAGCCTGATGTTATGAAAAACCAGGAGGCAGTTGATATGGTGAAATCCATTAAAGATCCTCAAGTAGCAGCCAAACGTCTAACAACAGAAGCATTGGAAAGAAAGAGCAAAGATGATATATCGTGCATCGTGATCCGTTTCGGATGA 792 0.4217 MDKKTSFLNKIKKATCLDSSTPDSGKGKCKSCSNIVAHGFHLVEGKSGHDMEDYHVAEYRNKKSHVLGLFAIFDGHLGNSVPSYLKDNLFNNILEEPNFWNDPKIAIKNAYRATDKYILENSMKLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGAANQLTVDHEPDSERRRIEKQGGFVTNLAGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVMKNQEAVDMVKSIKDPQVAAKRLTTEALERKSKDDISCIVIRFG* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0981 263 SMART PP2C_4 33 260 IPR001932 -
Vvi9g0981 263 ProSiteProfiles PPM-type phosphatase domain profile. 37 262 IPR001932 -
Vvi9g0981 263 CDD PP2Cc 51 262 IPR001932 -
Vvi9g0981 263 Gene3D - 32 263 IPR036457 -
Vvi9g0981 263 PANTHER PROTEIN PHOSPHATASE 218 261 IPR015655 GO:0004722|GO:0006470
Vvi9g0981 263 FunFam Probable protein phosphatase 2C 39 27 221 - -
Vvi9g0981 263 Pfam Protein phosphatase 2C 49 219 IPR001932 -
Vvi9g0981 263 SUPERFAMILY PP2C-like 30 263 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0981 Vvi-Chr9 13760895 13784503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0981 25 262 PP2C-type Phosphatase Gene Family AT4G28400 60.769 3.06e-110 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0981 K17506 - vvi:100258467 519.235