Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0967 ATGGATTGTGTGAGCCCAATCCTGGACGTCGCCACCCGCTTGTGGTATTGCACCGCCAAGCGTGTAGTTTATATTCGTGAGCTTGAAGAAAATCTCAACTCTCTGAAGAGCTTAACGGAGGAGCTGAGCAACTTAAGTAAGGATGTGATGGTAAGTGTTGAGTGTGAGGAGGAACTACAACAGAGTAGGCGTACGCATGAAGTGGATGGTTGGCTCCGCGCTGTGCAGGTCATGGAAGCTGAAGTGGAAGAAATATTGCAAAATGGGCGTCAAGAAATCCAACAGAAATGCCTCGGAACCTGTCCTAAGAATTGCAGGTCAAACTACAAGCTGGGGAAGATTGTGAGTAGAAAGATCGATGCTGTGACTGAATTAAAGGGCAAAGGGCATTTTGATTTTGTGGCTCATAGGTTGCCCTGTGCTCCAGTGGATGAGAGACCGATCGGGAAGACTGTGGGCTTAGACTTGATGTTCCAGAAGGTTCGGAGATGCCTGGAAGATGAGCAAGTAAGAAGTATTGGGTTGTATGGAATTGGGGGTGTTGGAAAAACGACCCTCTTGCGGAAAATCAATAATGAGTATTTTGGTAAAAGAAACGATTTTGATGTGGTGATATGGATAGTGGTGTCGAAACCAATCAGTGTAGAAAAAATTCAAGAAGTGATTCTGAAGAAATTATCGACCCTAGATCACAAATGGAAGAGTAGTAGCAAGGAGGAGAAGACTGCAGAAATATTCAAGTTGTTGAAAGCCAAAAACTTTGTGATATTGCTTGATGATATGTGGGACCGACTCGATCTCTTGGAGGTGGGGATCCCTCATTTGAGTGATCAAACGAAGTCCAAAGTAGTACTCACTACGCGATCTGAACGAGTATGCGATGAAATGGAAGTTCATGAGAGGATGAGGGTAGGGTGTTTGACACCGGGTGAAGCATTTTCTCTGTTCTGTGATAAGGTTGGTCAGAATATCCTGAATTCACATCCGGATATAAAAAGGCTTGCTAAGATTGTTGTTGAAGAATGTAAAGGACTGCCACTTGCCCTCATCGTCATTGGGCGATCAATGGCTAGCAGGAAAACTCCTCGGGAGTGGGAGCAAGCATTACAAGTTCTGAAGAGTTACCCAGCAGAGTTTTCAGGTATGGGAGATCAAGTCTTTCCAATTTTGAAATTCAGTTACGATCACTTGGACAATGATACCATCAAATCATGTTTCCTATATTGCTCTATATTCCCAGAAGACCATATAATTAGGAATGAAGGCCTCATAGATCTTTGGATCGGGGAGGGTCCTAGCTGTTCAAAAATATCTCACCTCCTTGATGCTGCAGAAGTGCATACGACATCTAGAGATGAGGACATGCCCAGGTTTGAAGGTGGTGGAGCTGCCACTTTCGGTTTTGCAAAGACTCACTATGCTTAA 1425 0.4421 MDCVSPILDVATRLWYCTAKRVVYIRELEENLNSLKSLTEELSNLSKDVMVSVECEEELQQSRRTHEVDGWLRAVQVMEAEVEEILQNGRQEIQQKCLGTCPKNCRSNYKLGKIVSRKIDAVTELKGKGHFDFVAHRLPCAPVDERPIGKTVGLDLMFQKVRRCLEDEQVRSIGLYGIGGVGKTTLLRKINNEYFGKRNDFDVVIWIVVSKPISVEKIQEVILKKLSTLDHKWKSSSKEEKTAEIFKLLKAKNFVILLDDMWDRLDLLEVGIPHLSDQTKSKVVLTTRSERVCDEMEVHERMRVGCLTPGEAFSLFCDKVGQNILNSHPDIKRLAKIVVEECKGLPLALIVIGRSMASRKTPREWEQALQVLKSYPAEFSGMGDQVFPILKFSYDHLDNDTIKSCFLYCSIFPEDHIIRNEGLIDLWIGEGPSCSKISHLLDAAEVHTTSRDEDMPRFEGGGAATFGFAKTHYA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0967 474 Gene3D - 394 455 IPR036388 -
Vvi9g0967 474 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 434 - -
Vvi9g0967 474 SMART AAA_5 169 314 IPR003593 GO:0016887
Vvi9g0967 474 Gene3D - 147 302 IPR027417 -
Vvi9g0967 474 CDD AAA 152 287 - -
Vvi9g0967 474 FunFam Probable disease resistance protein At1g61300 134 301 - -
Vvi9g0967 474 PRINTS Disease resistance protein signature 248 262 - -
Vvi9g0967 474 PRINTS Disease resistance protein signature 342 356 - -
Vvi9g0967 474 PRINTS Disease resistance protein signature 172 187 - -
Vvi9g0967 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 409 IPR027417 -
Vvi9g0967 474 Pfam NB-ARC domain 160 395 IPR002182 GO:0043531
Vvi9g0967 474 Gene3D - 307 393 IPR042197 -
Vvi9g0967 474 Coils Coil 25 48 - -
Vvi9g0967 474 FunFam Probable disease resistance protein At5g66910 306 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0967 Vvi-Chr9 13493838 13495988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0967 170 412 WRKY Transcription Factor Family AT5G45050 26.423 6.74e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0967 - K13459 vvi:100259933 773.081