Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0964 ATGGATAAGTATACGATAATCAAGGAAGTTGGTGATGGGACATTTGGAAGTGTTTGGCAAGCGATAAATAAGCAGATTGGTGAAGTTGTTGCTATAAAAAAGATGAAGAGAAAATATTATTCCCGGGAAGAATGTTTAAATCTGAGAGAAGTCAAGCCATTGAGAAAGATGAACCACCCAAACATTATGAAGCTCAAGGAAGTTTTTAGGGAAAATGATATTTTGTACTTTGTGTTTGAATACATGGAATGCAACCTTTACCAACTTATGAAAGATCAGTTGAAGCTTTTTTTTCGGAAACTGAAGTTCGAAATGGGTGCTTTCAAGTCCTGCTTACATGCACAGGCGTGGATATTTTCATCGCGACCTCAAGCCAGAGAACTTGTTGAGGTTCTGCGTCAATCATCCACATATGGTTCTGCAGTCGATATGTGGGCAATGGGTACTATCATGGCTGAATTGTTTACTCTCCTTCCTCTCTTTCCAGGATCGAGTGAAGCAGATGAAATTTACAAAATATGCAATTTTTCTAGTATTCATCTCTCTGTATTGATACCATCTACAAGTGAGGATGCAATCAACCTTATTACTTCACTTTGTTCATGGGATCCCTACAAGAGGCCAACAGCCTTGGAGGCTCTTCAGCATCCTTTCTTCCAGAGTTTCTTTTATGTCCCACCATCCCTTCGTCCTCGAACTGTTGTGACTAGGACACCTCCAGCTGGTGAAACAAAGAGAGCTTTGGAGCATAAATCTGCTAGGAGGTATGACAACAAGCTGCCACTTTGA 789 0.4043 MDKYTIIKEVGDGTFGSVWQAINKQIGEVVAIKKMKRKYYSREECLNLREVKPLRKMNHPNIMKLKEVFRENDILYFVFEYMECNLYQLMKDQLKLFFRKLKFEMGAFKSCLHAQAWIFSSRPQARELVEVLRQSSTYGSAVDMWAMGTIMAELFTLLPLFPGSSEADEIYKICNFSSIHLSVLIPSTSEDAINLITSLCSWDPYKRPTALEALQHPFFQSFFYVPPSLRPRTVVTRTPPAGETKRALEHKSARRYDNKLPL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0964 262 Pfam Protein kinase domain 130 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0964 262 Pfam Protein kinase domain 4 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0964 262 Gene3D Phosphorylase Kinase; domain 1 1 121 - -
Vvi9g0964 262 SUPERFAMILY Protein kinase-like (PK-like) 1 224 IPR011009 -
Vvi9g0964 262 MobiDBLite consensus disorder prediction 243 262 - -
Vvi9g0964 262 Gene3D Transferase(Phosphotransferase) domain 1 122 225 - -
Vvi9g0964 262 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 94 - -
Vvi9g0964 262 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Vvi9g0964 262 ProSiteProfiles Protein kinase domain profile. 4 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0964 262 FunFam serine/threonine-protein kinase MAK isoform X1 1 83 - -
Vvi9g0964 262 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0964 Vvi-Chr9 13451385 13452476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0964 1 221 Core Cell Cycle Gene Families AT1G66750 29.412 3.73e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Vvi9g0964 Pkinase 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0964 K08829 - vvi:104882706 380.563