Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0957 ATGCCCATTGACGCCTCTTCCCCTTCCAGCTCCGGCCAAATCGTTTGCGTCACCGGCGCCGGCGGCTTCATCGCCTCATGGATCGTCAAGCTGCTTCTTGAAAGGGGCTATACTGTTAAAGGAACTGTTAGAAATCCAGATGATCCAAAGAATTCTCATTTGAGAGAGCTTGAAGGAGCAAAGGAGAGATTGATTTTATGCAAAGCTGATCTTATGGATTATGAGAGTCTGAAAGAGGCCATCAATGGGTGCCATGGAGTTTTCCACACTGCTTCTCCTGTCACCGATGATCCAGAAGAGATGGTGGAACCAGCCGTGAATGGAACAAAGAATGTGATAATAGCAGCGGCTGAGGCCAAAGTCCGGAGAGTGGTGTTCACATCATCGATTGGAGCAGTGTACATGGACCCCAACAGGAGCCCAGATCAAGTTGTGGACGAGAGCTGTTGGAGTGATCTTGAATTCTGCAAGAACACCAAGAATTGGTATTGTTACGGAAAGGCGGTGGCGGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAAGAGGTGGACCTTGTGGTGGTGAACCCAGTGCTGGTGCTAGGACCATTGCTTCAATCCACTGTTAATGCCAGCATTATTCACATCCTCAAGTACCTCACCGGCTCCGCCAAAACATATGCAAACTCCGTTCAAGCCTATGTCCACGTTAAGGACGTAGCCCTCGCCCACATCCTCGTTTTCGAAGCTCCCTCTGCCTCCGGCCGCTACCTCTGTGCCGAGAGCGTGCTTCACCGCGGCGATGTCGTTGAAATTTTGGCCAAGTTTTTCCCGGAGTATCCCATTCCTACAAAGTGCTCAGATGAAGTGAAGCCAAGGGCCAAGCCGTACAAGTTCTCTAACCAAAAGCTGAGGGAGCTGGGGCTGGAGTTCATACCAGTGAAGCAGTGCCTCTACGAGACTGTTAAGACCCTTCAAGAGAAAGGACACGTGCCTGTCCCCCCACAGCATGACGACTCTCTTCGTATTCAGTCTTAA 1017 0.5113 MPIDASSPSSSGQIVCVTGAGGFIASWIVKLLLERGYTVKGTVRNPDDPKNSHLRELEGAKERLILCKADLMDYESLKEAINGCHGVFHTASPVTDDPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRSPDQVVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKEVDLVVVNPVLVLGPLLQSTVNASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVFEAPSASGRYLCAESVLHRGDVVEILAKFFPEYPIPTKCSDEVKPRAKPYKFSNQKLRELGLEFIPVKQCLYETVKTLQEKGHVPVPPQHDDSLRIQS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0957 338 CDD FR_SDR_e 15 302 - -
Vvi9g0957 338 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
Vvi9g0957 338 Gene3D - 4 337 - -
Vvi9g0957 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 315 - -
Vvi9g0957 338 FunFam Cinnamoyl-CoA reductase 1 6 336 - -
Vvi9g0957 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0957 Vvi-Chr9 13365772 13368452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0957 12 278 Monolignol Biosynthesis Gene Families AT1G80820 77.903 5.14e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0957 K09753 - vvi:100251623 671.003