Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0925 ATGCTGTCTACCAAGCTGATAAAACCATCATCTCCCACGCGATCCCACCTCCGGACCTTGAAACTATCCCCCATTGACCAACTATTTACATATACAGTCAAGCCGTCTGCCATTTGCTACTACTCTGCCGACAGCAGCAACAGCAGCAGAAGTGAAGATGTTGCAAGACGTAACCGCTTGGAGACATCACTGTCAGAGACCCTGACTCGTTTCTACACGCTAGCAGGAGGATACATCAAAGATAGTCACTCGGTTGATTGTAACGATGAAGGGGTTGAGTATTTGGAGGCCAAAGTGGAGGGCCAACTCAGTCAACTTCTAAGCAGGAGAGATGAGATGATCTACCAACTGGTTCGTTTATCAGGCGGAGAATCAACAAGTCCCGTAGCATCAATTCAGATTGGAGTTCGTATTCATCACATCGTTGTTGATGGATTCACTGCGGCAAGCTTTGTCAGCGCTTGGGCTACTGCAAGCAGAGTAGGCATAGGTAAATTAATTTTCCGACTTTCGGCTTGA 519 0.4721 MLSTKLIKPSSPTRSHLRTLKLSPIDQLFTYTVKPSAICYYSADSSNSSRSEDVARRNRLETSLSETLTRFYTLAGGYIKDSHSVDCNDEGVEYLEAKVEGQLSQLLSRRDEMIYQLVRLSGGESTSPVASIQIGVRIHHIVVDGFTAASFVSAWATASRVGIGKLIFRLSA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0925 172 Gene3D - 1 169 IPR023213 -
Vvi9g0925 172 Pfam Transferase family 3 160 - -
Vvi9g0925 172 PANTHER F21J9.9 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0925 Vvi-Chr9 12592201 12592719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0925 6 160 Monolignol Biosynthesis Gene Families AT5G48930 24.138 5.76e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0925 - K13065 vvi:104880349 321.242