Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0916 ATGAGTAGTAGTGGAGGAGAATTCATGGTAACAGTGAGGAGGAAAGAAGTAGTGGCAGCTATGCTACCAATGCAGAAGCACTGGCTACCATTGATGTTGCCGTGTTTTTCTGTTATAAGAAGCCACGTGGAAGTGCCAGCGGAGGTGACTGAGCTCAAATGTGGCGGAATTGTGGTGGCCTGTACATTTGATCACCGGATAGCAGACGCATATTCTACCAATATGTTCCTAGTTTCATGGGCTGAGATGGCTCAGTCCAAGCCCTTATCTGTAATACCATCTTTCCAGCGTTCTCTCCTCAACCCTCGACATCCAGGCTCCTATGCTCCGTCCCTTGACCACATGTACGTTCCCATCTCAGCCTTACCTCCGCCCAAAGTTCCACAACCTGGTGCTGATCCTCTCATAAGCCGTCCGTACTATGTCACTGCCGAGAAGCTCAGTCTACTCCAAACACTAGCCACCAGCAAGAGTAGCTCCTACAAGAGGACCAAACTAGAGTCTCTTAGTGCCTTTTTGTGGAAGATAGTGGCCAAAAGTGCTCACATGGAAAATGCAAACCAAAAAATATGCAAGATGAGTGTCGTGGTGGATGGAAGAAAGAGGTTAAGCAGTGGAGATGAGGATAGGACAACAGCGATGGCCTCATACTTTGGAAATGTGCTGTCCTTCCCCTTTGGTGAGAAGATAGTAAATGACCTCAAAGAAAAACCACTGAGTTGGGTGGGAGATGAAGTTCATGATTTCCTGGAAGCGGCTATGACAAAGGAACATTTCTTGGGGCTGATAGACTGGGTGGAGGCTCATCGCCCAGAGCCGGCTGCACTGAATATGTGCTGCAGTGGCAATAGCGACGGGCCAGGACTTACGGTGTCATCAGGGCAGAGGTTCCCGGTGGCAAAGGTGGATTTCTGGTGGGGTAGGCCGGCTCTAGGGTCATATCATTTTCCATGGGGTGAAGAAGTTGGGTACGTGATGCCAATGCCAAGCCCCACTGTAGATGGTGACTGGGTGGTGTACATGCACCTCTTGAAAGCCCAGATTGAGTTGATTGAGACTGAGGCTGCTGATATCTTTAGCCCCTTAACAGCCGACCATCTCAATTTGCTTAACGCAGATTAG 1122 0.4938 MSSSGGEFMVTVRRKEVVAAMLPMQKHWLPLMLPCFSVIRSHVEVPAEVTELKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAQSKPLSVIPSFQRSLLNPRHPGSYAPSLDHMYVPISALPPPKVPQPGADPLISRPYYVTAEKLSLLQTLATSKSSSYKRTKLESLSAFLWKIVAKSAHMENANQKICKMSVVVDGRKRLSSGDEDRTTAMASYFGNVLSFPFGEKIVNDLKEKPLSWVGDEVHDFLEAAMTKEHFLGLIDWVEAHRPEPAALNMCCSGNSDGPGLTVSSGQRFPVAKVDFWWGRPALGSYHFPWGEEVGYVMPMPSPTVDGDWVVYMHLLKAQIELIETEAADIFSPLTADHLNLLNAD* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0916 373 Gene3D - 121 353 IPR023213 -
Vvi9g0916 373 Gene3D - 10 116 IPR023213 -
Vvi9g0916 373 Coils Coil 366 373 - -
Vvi9g0916 373 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 45 330 - -
Vvi9g0916 373 Pfam Transferase family 48 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0916 Vvi-Chr9 12211328 12212802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0916 48 352 Monolignol Biosynthesis Gene Families AT5G48930 28.571 4.30e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0916 - - vvi:100854069 650.203