Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0907 ATGGGTGGTGGAGATTTCACAGTAACAGTGAGCAGGAAGGAAGTAGTGGCAGCTGTACTGCCTGTGCAGGAGTATTGGCTGCCACTATCTAACCTGGACTTGCTTTTGCCTCCAGTAGATGTGGGGGTGTTTTTCTGTTACAAGAAGCCACATGATTTAACATTTGGGTCCATGATTGGCGTTCTGAAGGAGGCGTTGGCCCAAGCACTGGTGTCCTATTATCCATTTGGAGGAGAAGTTTTGAGTAACTCAGCGGGTGAGCCCGAGCTCCTTTGCAACAATCGTGGGGTTGATTTCATGGAAGCTTATGCGGATGTACAACTACAAAACCTCAACTTGTATAACCCTGATGAAAGCATTGAGAGCAAGCTTGTCCCTAAGAAGAAACATGGCGTTCTGTCAGTCCAGGTGACTGAGCTCAAATGTGGCGGAGTTGTGGTGGCCTGTACATTCGATCATAGGATAGCAGACGCATATTCTGCCAATATGTTTCTAGTTTCATGGGCTGAAATGGCTCAGTCCAAACCATTATCAGTACTACCATCTTTCCGGCGCTCTCTCCTCAACGCTCGACGTCCGGGCTCCTATGATCCTTCCCTTGACGACATGTACGTCCCCATGTCAGCCTTACCTCCTCCCAAAGCTCCACAGTCTGGTGATGATCTTCTCATAAACCGCCTTTACTATGTCACAGCCGAACAGCTCAGTCTACTCCAATCACTAGCTACCAGCAAGAGTAGCTCCTGCAAGAGGACTAAACTAGAGTCTCTCAGTGCTTTTCTGTGGAAGATGGTGGCCAAAAGTGCAGTCACGGAAAACGCAAACCAAAAAATATGCAGGATGGGCACCGTGGTGGATGGAAGAAAGAGACTGAGCAGTGGAGACGAGGTTAAAGCAGCAATGATGGCCTCTTACTTCGGAAATGTGCTGTCCATCCCCTTTGGTAAGAAGACAATAAATGAACTGAAAGAGAAACCGTTGAGCTGGGTGGCAGATGCAATTCATGAGTACCTGGAAGGAGCAGTAACAAAGGAGCATTTCCTGGGGCTGATAGATTGGGTGGAGGCTCACCGTCCGGAGCCAGCTTTAGCGAAGATATACAGCAGTGGCAGTCGCGATGGACCAGCATTTGTGGTGTCATCAGGGCAGAGATTCCCAGCGTCAAGGGTGGATTTCGGGTGGGGTATGCCTGCTCTGGGGTCATACCATTTTCCATGGGGTGGGGAAGCTGGGTACGTGATGCCAATGCCGAGTCCTGTCAGAGATGGAGACTGGGTGGTGTACATGCACCTCTCCGTGGGGCAGGTAGAGTGGATTGAGACTGAGGCTGCTCACATCTTTAGGCCCTTAAGTTCTGAATATCTCAACTTGAGCAACTCAGATTAG 1386 0.4964 MGGGDFTVTVSRKEVVAAVLPVQEYWLPLSNLDLLLPPVDVGVFFCYKKPHDLTFGSMIGVLKEALAQALVSYYPFGGEVLSNSAGEPELLCNNRGVDFMEAYADVQLQNLNLYNPDESIESKLVPKKKHGVLSVQVTELKCGGVVVACTFDHRIADAYSANMFLVSWAEMAQSKPLSVLPSFRRSLLNARRPGSYDPSLDDMYVPMSALPPPKAPQSGDDLLINRLYYVTAEQLSLLQSLATSKSSSCKRTKLESLSAFLWKMVAKSAVTENANQKICRMGTVVDGRKRLSSGDEVKAAMMASYFGNVLSIPFGKKTINELKEKPLSWVADAIHEYLEGAVTKEHFLGLIDWVEAHRPEPALAKIYSSGSRDGPAFVVSSGQRFPASRVDFGWGMPALGSYHFPWGGEAGYVMPMPSPVRDGDWVVYMHLSVGQVEWIETEAAHIFRPLSSEYLNLSNSD* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0907 461 Pfam Transferase family 7 444 - -
Vvi9g0907 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 418 - -
Vvi9g0907 461 Gene3D - 207 441 IPR023213 -
Vvi9g0907 461 Gene3D - 4 200 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0907 Vvi-Chr9 11997270 11998743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0907 17 440 Monolignol Biosynthesis Gene Families AT5G48930 26.959 2.45e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0907 - - vvi:100241259 913.679