Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0905 ATGGGTGGTGGAGATTTCACAGTAACAGTGAGCAGAAAGGAAGTAGTGGCAGCTGTACTGCCTGTGCAGGAGTACTGGCTGCCAACGTCTAACCTGGACTTGCTTTTGCCTCCAGTAGATGTGGGCGTGTTTTTCTGTTACAAGAAGCCACATGATTTAACATTTGGGTCCATGATTGGCGTTCTGAAGGAGGCCCTGGCCCAAGCACTGGTGTCCTATTATCCATTTGCAGGGGAAGTTTTGAGTAACTCAGCGGGTGAGCCCGAGCTCCTTTGCAACAACCGTGGGGTTGATTTCATGGAAGCTTATGCGGATGTACAACTACAAAACCTCAACTTGTATAACCCTGATGAAAGCATTGAAAGCAAGCTTGTCCCTAAGAAGAAACATGGCGTTCTGTCAGTCCAGGTGACTGAGCTCAAATGTGGCGGAGTTGTGGTGGCCTGTACATTCGATCATAGGATAGCAGACGCATATTCTGCCAATATGTTTCTAGTTTCATGGGCTGAAATGGCTCAGTCCAAGCCATTATCCGTACTACCATCTTTCCGGCGCTCTCTCCTCAACCCTCGACGTCCGGGCTCCTATGATCCTTCCCTTGACAACATGTACGTCCCCATGTCAGCCTTACCTCCTCCCAAAGCTCCACAGCCTGGTGATGATCTTCTCATAAACCGCCTTTACTATGTCACAGGCGAGCAGCTCAGTCTACTCCAATCACTAGCCACCAGCAAGAGTAACTCCTGCAAGAGGACCAAACTAGAGTCTCTCAGTGCTTTTCTGTGGAAGATGGTGGCCAAAAGTGCAGTCACGGAAAACGCAAACCAAAAAGTATGCAGGATGGGCACCGTGGTGGATGGAAGAAAGAGACTGAGCAGTGGAGACGAGGTTAAAGCAGCAATGTTGGCCTCTTACTTCGGAAATGTACTGTCCATACCCTTTGGTAAGAAGACAATAAATGAACTGAAAGAGAAACCATTGAGCTGGGTGGCAGATGCAATTCGTGAGTACCTGGAAGGAGCAGTAACAAAGGAGCATTTCCTGGGGCTGATAGATTGGGTGGAGGCTCACCGTCCGGAGCCAGCTTTAGCGAAGATATACAACAGTGGCAGTCGCGATGGACCAGCATTCGTGGTGTCATCAGGGCAGAGATTCCCAGTGTCAAGGGTGGATTTCGGGTGGGGTATGCCGGCTCTGGGGTCATACCATTTTCCATGGGGTGGGGAAGCTGGGTACGTGATGCCAATGCCGAGTCCTGTCAGAGATGGAGACTGGGTGGTGTACATGCACCTCTCCGTGGGGCAGATAGAGTGGATTGAGACTCAGGCTGCTCACATCTTTAGACCTTTAAATTCTGAATATCTCAACTTGAGCAACTCAGATTAG 1386 0.4978 MGGGDFTVTVSRKEVVAAVLPVQEYWLPTSNLDLLLPPVDVGVFFCYKKPHDLTFGSMIGVLKEALAQALVSYYPFAGEVLSNSAGEPELLCNNRGVDFMEAYADVQLQNLNLYNPDESIESKLVPKKKHGVLSVQVTELKCGGVVVACTFDHRIADAYSANMFLVSWAEMAQSKPLSVLPSFRRSLLNPRRPGSYDPSLDNMYVPMSALPPPKAPQPGDDLLINRLYYVTGEQLSLLQSLATSKSNSCKRTKLESLSAFLWKMVAKSAVTENANQKVCRMGTVVDGRKRLSSGDEVKAAMLASYFGNVLSIPFGKKTINELKEKPLSWVADAIREYLEGAVTKEHFLGLIDWVEAHRPEPALAKIYNSGSRDGPAFVVSSGQRFPVSRVDFGWGMPALGSYHFPWGGEAGYVMPMPSPVRDGDWVVYMHLSVGQIEWIETQAAHIFRPLNSEYLNLSNSD* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0905 461 Pfam Transferase family 7 444 - -
Vvi9g0905 461 Gene3D - 207 441 IPR023213 -
Vvi9g0905 461 Gene3D - 4 200 IPR023213 -
Vvi9g0905 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0905 Vvi-Chr9 11960802 11962271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0905 17 440 Monolignol Biosynthesis Gene Families AT5G48930 26.728 3.09e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0905 - - vvi:100243003 928.702